Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2165 and GFF2166 are separated by 7 nucleotides GFF2166 and GFF2167 are separated by 476 nucleotides
GFF2165 - Macrolide export ATP-binding/permease protein MacB, at 860,518 to 862,533
GFF2165
GFF2166 - hypothetical protein, at 862,541 to 863,398
GFF2166
GFF2167 - Catecholate siderophore receptor Fiu, at 863,875 to 866,220
GFF2167
Position (kb) 862
863
864 Strain fitness (log2 ratio) -2
-1
0
1
2 at 861.613 kb on + strand, within GFF2165 at 861.613 kb on + strand, within GFF2165 at 861.613 kb on + strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.614 kb on - strand, within GFF2165 at 861.943 kb on + strand, within GFF2165 at 861.952 kb on + strand, within GFF2165 at 861.952 kb on + strand, within GFF2165 at 861.952 kb on + strand, within GFF2165 at 861.952 kb on + strand, within GFF2165 at 861.953 kb on - strand, within GFF2165 at 861.953 kb on - strand, within GFF2165 at 862.384 kb on + strand at 862.411 kb on + strand at 862.411 kb on + strand at 862.411 kb on + strand at 862.412 kb on - strand at 862.412 kb on - strand at 862.474 kb on + strand at 862.475 kb on - strand at 862.475 kb on - strand at 862.809 kb on + strand, within GFF2166 at 862.825 kb on - strand, within GFF2166 at 862.869 kb on + strand, within GFF2166 at 863.202 kb on + strand, within GFF2166 at 863.203 kb on - strand, within GFF2166 at 863.256 kb on + strand, within GFF2166 at 863.257 kb on - strand, within GFF2166 at 863.257 kb on - strand, within GFF2166 at 863.257 kb on - strand, within GFF2166 at 863.257 kb on - strand, within GFF2166 at 863.285 kb on - strand, within GFF2166 at 863.379 kb on + strand at 863.379 kb on + strand at 863.520 kb on - strand at 863.521 kb on + strand at 863.522 kb on - strand at 863.530 kb on + strand at 863.531 kb on - strand at 863.551 kb on - strand at 863.567 kb on - strand at 863.589 kb on - strand at 863.589 kb on - strand at 863.607 kb on - strand at 863.636 kb on + strand at 863.636 kb on + strand at 863.637 kb on - strand at 863.637 kb on - strand at 863.637 kb on - strand at 863.638 kb on + strand at 863.669 kb on - strand at 863.780 kb on - strand at 864.311 kb on - strand, within GFF2167 at 864.311 kb on - strand, within GFF2167
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 861,613 + GFF2165 0.54 +0.0 861,613 + GFF2165 0.54 -0.6 861,613 + GFF2165 0.54 -0.1 861,614 - GFF2165 0.54 -1.9 861,614 - GFF2165 0.54 +0.5 861,614 - GFF2165 0.54 +1.0 861,614 - GFF2165 0.54 -0.0 861,614 - GFF2165 0.54 +0.5 861,614 - GFF2165 0.54 -0.7 861,614 - GFF2165 0.54 +0.6 861,614 - GFF2165 0.54 -0.1 861,943 + GFF2165 0.71 -0.6 861,952 + GFF2165 0.71 -0.1 861,952 + GFF2165 0.71 -0.1 861,952 + GFF2165 0.71 -0.1 861,952 + GFF2165 0.71 -1.2 861,953 - GFF2165 0.71 +2.1 861,953 - GFF2165 0.71 +0.6 862,384 + -0.6 862,411 + -0.7 862,411 + +0.3 862,411 + +0.5 862,412 - -0.2 862,412 - -0.2 862,474 + +0.1 862,475 - -1.8 862,475 - +0.3 862,809 + GFF2166 0.31 -0.1 862,825 - GFF2166 0.33 -0.8 862,869 + GFF2166 0.38 +0.0 863,202 + GFF2166 0.77 -0.8 863,203 - GFF2166 0.77 -1.1 863,256 + GFF2166 0.83 -0.1 863,257 - GFF2166 0.83 -0.5 863,257 - GFF2166 0.83 -0.9 863,257 - GFF2166 0.83 -0.8 863,257 - GFF2166 0.83 +0.2 863,285 - GFF2166 0.87 +0.5 863,379 + -0.1 863,379 + +0.4 863,520 - -0.5 863,521 + -1.7 863,522 - -0.2 863,530 + +0.9 863,531 - -0.6 863,551 - -1.2 863,567 - +0.0 863,589 - +0.5 863,589 - +0.4 863,607 - -0.4 863,636 + -0.0 863,636 + -0.5 863,637 - +0.7 863,637 - +0.2 863,637 - -0.0 863,638 + -0.2 863,669 - +0.9 863,780 - +0.9 864,311 - GFF2167 0.19 -0.1 864,311 - GFF2167 0.19 -0.8
Or see this region's nucleotide sequence