Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2150 and GFF2151 are separated by 65 nucleotides GFF2151 and GFF2152 are separated by 3 nucleotides GFF2152 and GFF2153 are separated by 403 nucleotides
GFF2150 - Potassium-transporting ATPase ATP-binding subunit, at 838,847 to 841,150
GFF2150
GFF2151 - hypothetical protein, at 841,216 to 841,704
GFF2151
GFF2152 - hypothetical protein, at 841,708 to 842,748
GFF2152
GFF2153 - hypothetical protein, at 843,152 to 844,057
GFF2153
Position (kb) 841
842
843 Strain fitness (log2 ratio) -1
0
1 at 840.747 kb on - strand, within GFF2150 at 840.747 kb on - strand, within GFF2150 at 840.747 kb on - strand, within GFF2150 at 840.948 kb on + strand at 840.949 kb on - strand at 841.200 kb on + strand at 841.295 kb on - strand, within GFF2151 at 841.702 kb on + strand at 841.702 kb on + strand at 841.703 kb on - strand at 841.709 kb on + strand at 841.710 kb on - strand at 841.710 kb on - strand at 841.710 kb on - strand at 841.823 kb on + strand, within GFF2152 at 841.824 kb on - strand, within GFF2152 at 841.824 kb on - strand, within GFF2152 at 842.126 kb on + strand, within GFF2152 at 842.127 kb on - strand, within GFF2152 at 842.127 kb on - strand, within GFF2152 at 842.127 kb on - strand, within GFF2152 at 842.318 kb on + strand, within GFF2152 at 842.318 kb on + strand, within GFF2152 at 842.318 kb on + strand, within GFF2152 at 842.319 kb on - strand, within GFF2152 at 842.319 kb on - strand, within GFF2152 at 842.319 kb on - strand, within GFF2152 at 842.319 kb on - strand, within GFF2152 at 842.436 kb on - strand, within GFF2152 at 842.436 kb on - strand, within GFF2152 at 842.725 kb on + strand at 842.726 kb on - strand at 842.790 kb on - strand at 843.041 kb on - strand at 843.077 kb on + strand at 843.078 kb on - strand at 843.152 kb on - strand at 843.369 kb on - strand, within GFF2153 at 843.383 kb on + strand, within GFF2153 at 843.384 kb on - strand, within GFF2153 at 843.384 kb on - strand, within GFF2153 at 843.384 kb on - strand, within GFF2153 at 843.641 kb on + strand, within GFF2153
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 840,747 - GFF2150 0.82 +0.4 840,747 - GFF2150 0.82 -1.0 840,747 - GFF2150 0.82 -0.4 840,948 + -0.7 840,949 - -0.5 841,200 + -0.0 841,295 - GFF2151 0.16 +0.5 841,702 + -0.2 841,702 + -1.0 841,703 - -0.8 841,709 + -0.1 841,710 - +0.4 841,710 - -0.4 841,710 - +0.1 841,823 + GFF2152 0.11 -0.3 841,824 - GFF2152 0.11 +0.0 841,824 - GFF2152 0.11 -0.1 842,126 + GFF2152 0.40 -0.2 842,127 - GFF2152 0.40 +0.4 842,127 - GFF2152 0.40 +0.4 842,127 - GFF2152 0.40 +0.1 842,318 + GFF2152 0.59 -0.7 842,318 + GFF2152 0.59 +0.8 842,318 + GFF2152 0.59 +0.1 842,319 - GFF2152 0.59 +0.4 842,319 - GFF2152 0.59 +0.2 842,319 - GFF2152 0.59 -0.3 842,319 - GFF2152 0.59 +0.1 842,436 - GFF2152 0.70 -0.9 842,436 - GFF2152 0.70 +0.2 842,725 + +0.3 842,726 - -0.1 842,790 - +0.1 843,041 - +0.0 843,077 + -1.0 843,078 - +0.6 843,152 - +0.1 843,369 - GFF2153 0.24 -0.4 843,383 + GFF2153 0.25 +0.3 843,384 - GFF2153 0.26 +0.3 843,384 - GFF2153 0.26 -0.2 843,384 - GFF2153 0.26 +1.1 843,641 + GFF2153 0.54 +0.3
Or see this region's nucleotide sequence