Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2119 and GFF2120 are separated by 277 nucleotides GFF2120 and GFF2121 are separated by 183 nucleotides
GFF2119 - hypothetical protein, at 803,784 to 804,500
GFF2119
GFF2120 - hypothetical protein, at 804,778 to 804,951
GFF2120
GFF2121 - hypothetical protein, at 805,135 to 805,419
GFF2121
Position (kb) 804
805 Strain fitness (log2 ratio) -1
0
1 at 803.796 kb on + strand at 803.796 kb on + strand at 803.797 kb on - strand at 803.895 kb on + strand, within GFF2119 at 803.981 kb on + strand, within GFF2119 at 803.982 kb on - strand, within GFF2119 at 803.982 kb on - strand, within GFF2119 at 804.145 kb on + strand, within GFF2119 at 804.145 kb on + strand, within GFF2119 at 804.146 kb on - strand, within GFF2119 at 804.146 kb on - strand, within GFF2119 at 804.174 kb on - strand, within GFF2119 at 804.498 kb on + strand at 804.498 kb on + strand at 804.556 kb on + strand at 804.556 kb on + strand at 804.556 kb on + strand at 804.557 kb on - strand at 804.779 kb on + strand at 804.795 kb on + strand at 804.795 kb on + strand at 804.796 kb on - strand, within GFF2120 at 804.825 kb on + strand, within GFF2120 at 804.826 kb on - strand, within GFF2120 at 804.852 kb on + strand, within GFF2120 at 804.852 kb on + strand, within GFF2120 at 804.852 kb on + strand, within GFF2120 at 804.853 kb on - strand, within GFF2120 at 804.853 kb on - strand, within GFF2120 at 804.853 kb on - strand, within GFF2120 at 804.929 kb on + strand, within GFF2120 at 804.929 kb on + strand, within GFF2120 at 804.929 kb on + strand, within GFF2120 at 804.929 kb on + strand, within GFF2120 at 804.933 kb on + strand, within GFF2120 at 804.933 kb on + strand, within GFF2120 at 804.934 kb on - strand at 804.999 kb on + strand at 805.039 kb on - strand at 805.208 kb on - strand, within GFF2121 at 805.366 kb on + strand, within GFF2121 at 805.367 kb on - strand, within GFF2121 at 805.367 kb on - strand, within GFF2121 at 805.367 kb on - strand, within GFF2121 at 805.368 kb on + strand, within GFF2121 at 805.369 kb on - strand, within GFF2121 at 805.877 kb on + strand at 805.905 kb on - strand at 805.935 kb on + strand at 805.935 kb on + strand at 805.936 kb on - strand at 805.936 kb on - strand at 805.936 kb on - strand at 805.936 kb on - strand at 805.936 kb on - strand at 805.936 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 803,796 + -1.5 803,796 + -0.0 803,797 - -1.5 803,895 + GFF2119 0.15 -1.1 803,981 + GFF2119 0.27 +0.1 803,982 - GFF2119 0.28 +0.6 803,982 - GFF2119 0.28 -0.5 804,145 + GFF2119 0.50 -0.3 804,145 + GFF2119 0.50 +0.3 804,146 - GFF2119 0.50 +0.4 804,146 - GFF2119 0.50 +1.0 804,174 - GFF2119 0.54 +0.5 804,498 + +0.4 804,498 + +0.3 804,556 + -0.0 804,556 + -0.2 804,556 + +0.6 804,557 - +0.2 804,779 + -0.7 804,795 + -0.4 804,795 + +0.0 804,796 - GFF2120 0.10 -0.0 804,825 + GFF2120 0.27 -0.2 804,826 - GFF2120 0.28 -0.5 804,852 + GFF2120 0.43 +0.0 804,852 + GFF2120 0.43 -0.4 804,852 + GFF2120 0.43 +1.0 804,853 - GFF2120 0.43 +0.4 804,853 - GFF2120 0.43 +0.6 804,853 - GFF2120 0.43 +0.6 804,929 + GFF2120 0.87 -0.1 804,929 + GFF2120 0.87 -0.7 804,929 + GFF2120 0.87 -0.7 804,929 + GFF2120 0.87 -0.0 804,933 + GFF2120 0.89 -0.0 804,933 + GFF2120 0.89 +1.3 804,934 - -0.0 804,999 + -0.2 805,039 - +1.1 805,208 - GFF2121 0.26 +0.6 805,366 + GFF2121 0.81 +0.2 805,367 - GFF2121 0.81 +1.2 805,367 - GFF2121 0.81 -0.3 805,367 - GFF2121 0.81 +0.3 805,368 + GFF2121 0.82 +0.7 805,369 - GFF2121 0.82 +0.1 805,877 + -0.2 805,905 - +0.6 805,935 + +0.4 805,935 + +0.9 805,936 - +0.7 805,936 - -0.1 805,936 - +0.0 805,936 - -0.0 805,936 - +0.1 805,936 - +0.8
Or see this region's nucleotide sequence