Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1723 and GFF1724 are separated by 90 nucleotides GFF1724 and GFF1725 are separated by 343 nucleotides
GFF1723 - hypothetical protein, at 372,330 to 373,034
GFF1723
GFF1724 - hypothetical protein, at 373,125 to 373,955
GFF1724
GFF1725 - putative glycosyltransferase, at 374,299 to 375,333
GFF1725
Position (kb) 373
374 Strain fitness (log2 ratio) -1
0
1 at 372.173 kb on + strand at 372.251 kb on + strand at 372.251 kb on + strand at 372.251 kb on + strand at 372.251 kb on + strand at 373.216 kb on + strand, within GFF1724 at 373.217 kb on - strand, within GFF1724 at 373.485 kb on + strand, within GFF1724 at 373.486 kb on - strand, within GFF1724 at 373.523 kb on - strand, within GFF1724 at 373.523 kb on - strand, within GFF1724 at 373.523 kb on - strand, within GFF1724 at 373.523 kb on - strand, within GFF1724 at 373.523 kb on - strand, within GFF1724 at 373.523 kb on - strand, within GFF1724 at 373.523 kb on - strand, within GFF1724 at 373.630 kb on + strand, within GFF1724 at 373.631 kb on - strand, within GFF1724 at 373.631 kb on - strand, within GFF1724 at 373.631 kb on - strand, within GFF1724 at 373.813 kb on + strand, within GFF1724 at 373.814 kb on - strand, within GFF1724 at 373.814 kb on - strand, within GFF1724 at 373.814 kb on - strand, within GFF1724 at 373.814 kb on - strand, within GFF1724 at 373.837 kb on + strand, within GFF1724 at 373.838 kb on - strand, within GFF1724 at 373.894 kb on + strand at 374.332 kb on + strand at 374.333 kb on - strand at 374.428 kb on + strand, within GFF1725 at 374.429 kb on - strand, within GFF1725 at 374.429 kb on - strand, within GFF1725 at 374.524 kb on + strand, within GFF1725 at 374.525 kb on - strand, within GFF1725 at 374.732 kb on - strand, within GFF1725 at 374.732 kb on - strand, within GFF1725 at 374.732 kb on - strand, within GFF1725
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 372,173 + -0.0 372,251 + +0.0 372,251 + +0.9 372,251 + +0.1 372,251 + -0.5 373,216 + GFF1724 0.11 -0.0 373,217 - GFF1724 0.11 +0.0 373,485 + GFF1724 0.43 +0.2 373,486 - GFF1724 0.43 +0.3 373,523 - GFF1724 0.48 +0.2 373,523 - GFF1724 0.48 +0.1 373,523 - GFF1724 0.48 +0.4 373,523 - GFF1724 0.48 -0.2 373,523 - GFF1724 0.48 +0.4 373,523 - GFF1724 0.48 -0.1 373,523 - GFF1724 0.48 -0.3 373,630 + GFF1724 0.61 +0.4 373,631 - GFF1724 0.61 -0.8 373,631 - GFF1724 0.61 +0.5 373,631 - GFF1724 0.61 +1.0 373,813 + GFF1724 0.83 +0.3 373,814 - GFF1724 0.83 -0.4 373,814 - GFF1724 0.83 -0.5 373,814 - GFF1724 0.83 +0.0 373,814 - GFF1724 0.83 -0.3 373,837 + GFF1724 0.86 +0.4 373,838 - GFF1724 0.86 +1.5 373,894 + +1.2 374,332 + +0.6 374,333 - -0.1 374,428 + GFF1725 0.12 +0.2 374,429 - GFF1725 0.13 -0.4 374,429 - GFF1725 0.13 -0.1 374,524 + GFF1725 0.22 +0.4 374,525 - GFF1725 0.22 +0.2 374,732 - GFF1725 0.42 +0.8 374,732 - GFF1725 0.42 +1.7 374,732 - GFF1725 0.42 -1.4
Or see this region's nucleotide sequence