Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1690 and GFF1691 are separated by 83 nucleotides GFF1691 and GFF1692 are separated by 124 nucleotides
GFF1690 - hypothetical protein, at 340,476 to 341,093
GFF1690
GFF1691 - hypothetical protein, at 341,177 to 342,550
GFF1691
GFF1692 - putative GTPase, at 342,675 to 343,652
GFF1692
Position (kb) 341
342
343 Strain fitness (log2 ratio) -1
0
1 at 340.301 kb on - strand at 340.305 kb on + strand at 340.305 kb on + strand at 340.306 kb on - strand at 340.306 kb on - strand at 340.306 kb on - strand at 340.311 kb on + strand at 340.590 kb on + strand, within GFF1690 at 340.590 kb on + strand, within GFF1690 at 340.590 kb on + strand, within GFF1690 at 340.590 kb on + strand, within GFF1690 at 340.591 kb on - strand, within GFF1690 at 340.591 kb on - strand, within GFF1690 at 340.591 kb on - strand, within GFF1690 at 340.591 kb on - strand, within GFF1690 at 340.797 kb on + strand, within GFF1690 at 340.797 kb on + strand, within GFF1690 at 340.797 kb on + strand, within GFF1690 at 340.798 kb on - strand, within GFF1690 at 340.798 kb on - strand, within GFF1690 at 341.181 kb on + strand at 341.181 kb on + strand at 341.181 kb on + strand at 341.182 kb on - strand at 341.182 kb on - strand at 341.182 kb on - strand at 341.182 kb on - strand at 341.208 kb on + strand at 341.209 kb on - strand at 341.275 kb on - strand at 341.315 kb on + strand, within GFF1691 at 341.315 kb on + strand, within GFF1691 at 341.315 kb on + strand, within GFF1691 at 341.315 kb on + strand, within GFF1691 at 341.332 kb on + strand, within GFF1691 at 341.476 kb on - strand, within GFF1691 at 341.553 kb on + strand, within GFF1691 at 341.554 kb on - strand, within GFF1691 at 341.554 kb on - strand, within GFF1691 at 341.727 kb on + strand, within GFF1691 at 341.728 kb on - strand, within GFF1691 at 341.752 kb on - strand, within GFF1691 at 342.010 kb on - strand, within GFF1691 at 342.010 kb on - strand, within GFF1691 at 342.010 kb on - strand, within GFF1691 at 342.593 kb on - strand at 342.693 kb on + strand at 343.022 kb on + strand, within GFF1692 at 343.192 kb on + strand, within GFF1692 at 343.193 kb on - strand, within GFF1692 at 343.193 kb on - strand, within GFF1692 at 343.193 kb on - strand, within GFF1692 at 343.193 kb on - strand, within GFF1692
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 340,301 - -0.5 340,305 + -0.1 340,305 + +0.2 340,306 - -0.2 340,306 - +0.5 340,306 - +0.2 340,311 + -1.2 340,590 + GFF1690 0.18 -0.9 340,590 + GFF1690 0.18 +0.2 340,590 + GFF1690 0.18 +0.4 340,590 + GFF1690 0.18 -0.3 340,591 - GFF1690 0.19 +0.3 340,591 - GFF1690 0.19 +1.2 340,591 - GFF1690 0.19 +0.2 340,591 - GFF1690 0.19 +0.4 340,797 + GFF1690 0.52 +0.2 340,797 + GFF1690 0.52 -0.1 340,797 + GFF1690 0.52 +0.5 340,798 - GFF1690 0.52 -0.2 340,798 - GFF1690 0.52 +1.2 341,181 + -0.2 341,181 + +0.3 341,181 + +0.9 341,182 - +0.0 341,182 - -0.0 341,182 - -0.6 341,182 - -0.3 341,208 + +0.6 341,209 - +0.6 341,275 - -0.1 341,315 + GFF1691 0.10 +0.4 341,315 + GFF1691 0.10 +0.5 341,315 + GFF1691 0.10 -0.1 341,315 + GFF1691 0.10 -0.5 341,332 + GFF1691 0.11 -0.2 341,476 - GFF1691 0.22 +1.4 341,553 + GFF1691 0.27 +0.9 341,554 - GFF1691 0.27 +0.6 341,554 - GFF1691 0.27 -0.7 341,727 + GFF1691 0.40 +0.6 341,728 - GFF1691 0.40 +0.4 341,752 - GFF1691 0.42 -0.3 342,010 - GFF1691 0.61 -0.1 342,010 - GFF1691 0.61 +0.0 342,010 - GFF1691 0.61 +0.1 342,593 - -0.6 342,693 + +0.9 343,022 + GFF1692 0.35 +0.3 343,192 + GFF1692 0.53 -0.6 343,193 - GFF1692 0.53 -0.5 343,193 - GFF1692 0.53 -0.1 343,193 - GFF1692 0.53 -0.1 343,193 - GFF1692 0.53 -0.4
Or see this region's nucleotide sequence