Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1670 and GFF1671 are separated by 92 nucleotides GFF1671 and GFF1672 are separated by 220 nucleotides GFF1672 and GFF1673 are separated by 154 nucleotides
GFF1670 - hypothetical protein, at 325,189 to 326,322
GFF1670
GFF1671 - hypothetical protein, at 326,415 to 326,981
GFF1671
GFF1672 - hypothetical protein, at 327,202 to 327,837
GFF1672
GFF1673 - Putative alcohol dehydrogenase D, at 327,992 to 329,119
GFF1673
Position (kb) 327
328 Strain fitness (log2 ratio) -1
0
1
2 at 326.779 kb on + strand, within GFF1671 at 326.779 kb on + strand, within GFF1671 at 326.780 kb on - strand, within GFF1671 at 326.800 kb on + strand, within GFF1671 at 326.801 kb on - strand, within GFF1671 at 327.389 kb on - strand, within GFF1672 at 327.389 kb on - strand, within GFF1672 at 327.636 kb on + strand, within GFF1672 at 327.636 kb on + strand, within GFF1672 at 327.717 kb on - strand, within GFF1672 at 327.717 kb on - strand, within GFF1672 at 327.717 kb on - strand, within GFF1672 at 328.040 kb on + strand at 328.040 kb on + strand at 328.412 kb on + strand, within GFF1673 at 328.412 kb on + strand, within GFF1673 at 328.412 kb on + strand, within GFF1673 at 328.412 kb on + strand, within GFF1673 at 328.412 kb on + strand, within GFF1673 at 328.412 kb on + strand, within GFF1673 at 328.413 kb on - strand, within GFF1673 at 328.413 kb on - strand, within GFF1673 at 328.445 kb on + strand, within GFF1673 at 328.445 kb on + strand, within GFF1673 at 328.446 kb on - strand, within GFF1673 at 328.830 kb on - strand, within GFF1673 at 328.830 kb on - strand, within GFF1673
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 326,779 + GFF1671 0.64 -0.3 326,779 + GFF1671 0.64 -0.0 326,780 - GFF1671 0.64 +0.6 326,800 + GFF1671 0.68 +1.1 326,801 - GFF1671 0.68 -0.3 327,389 - GFF1672 0.29 +0.1 327,389 - GFF1672 0.29 +0.2 327,636 + GFF1672 0.68 +0.5 327,636 + GFF1672 0.68 -0.4 327,717 - GFF1672 0.81 -1.0 327,717 - GFF1672 0.81 -0.2 327,717 - GFF1672 0.81 -0.2 328,040 + -0.2 328,040 + +0.6 328,412 + GFF1673 0.37 +0.5 328,412 + GFF1673 0.37 -0.4 328,412 + GFF1673 0.37 +0.3 328,412 + GFF1673 0.37 -0.4 328,412 + GFF1673 0.37 -1.2 328,412 + GFF1673 0.37 +0.7 328,413 - GFF1673 0.37 -0.2 328,413 - GFF1673 0.37 +1.1 328,445 + GFF1673 0.40 +0.5 328,445 + GFF1673 0.40 -0.7 328,446 - GFF1673 0.40 +1.0 328,830 - GFF1673 0.74 -0.5 328,830 - GFF1673 0.74 +1.9
Or see this region's nucleotide sequence