Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1667 and GFF1668 overlap by 4 nucleotides GFF1668 and GFF1669 are separated by 22 nucleotides GFF1669 and GFF1670 are separated by 90 nucleotides
GFF1667 - Rhodocoxin reductase, at 322,411 to 323,589
GFF1667
GFF1668 - 2-hydroxychromene-2-carboxylate isomerase, at 323,586 to 324,212
GFF1668
GFF1669 - Thiosulfate sulfurtransferase, at 324,235 to 325,098
GFF1669
GFF1670 - hypothetical protein, at 325,189 to 326,322
GFF1670
Position (kb) 323
324
325 Strain fitness (log2 ratio) -1
0
1 at 322.613 kb on + strand, within GFF1667 at 322.614 kb on - strand, within GFF1667 at 322.614 kb on - strand, within GFF1667 at 322.646 kb on + strand, within GFF1667 at 322.775 kb on + strand, within GFF1667 at 322.775 kb on + strand, within GFF1667 at 322.776 kb on - strand, within GFF1667 at 322.776 kb on - strand, within GFF1667 at 322.776 kb on - strand, within GFF1667 at 323.127 kb on + strand, within GFF1667 at 323.127 kb on + strand, within GFF1667 at 323.129 kb on + strand, within GFF1667 at 323.129 kb on + strand, within GFF1667 at 323.130 kb on - strand, within GFF1667 at 323.387 kb on + strand, within GFF1667 at 323.387 kb on + strand, within GFF1667 at 323.477 kb on + strand at 323.477 kb on + strand at 323.477 kb on + strand at 323.478 kb on - strand at 323.513 kb on + strand at 323.668 kb on + strand, within GFF1668 at 323.668 kb on + strand, within GFF1668 at 323.668 kb on + strand, within GFF1668 at 323.669 kb on - strand, within GFF1668 at 323.689 kb on + strand, within GFF1668 at 323.689 kb on + strand, within GFF1668 at 323.689 kb on + strand, within GFF1668 at 323.689 kb on + strand, within GFF1668 at 323.689 kb on + strand, within GFF1668 at 323.689 kb on + strand, within GFF1668 at 323.690 kb on - strand, within GFF1668 at 323.690 kb on - strand, within GFF1668 at 323.690 kb on - strand, within GFF1668 at 323.690 kb on - strand, within GFF1668 at 323.885 kb on + strand, within GFF1668 at 323.886 kb on - strand, within GFF1668 at 324.028 kb on + strand, within GFF1668 at 324.166 kb on + strand at 324.166 kb on + strand at 324.166 kb on + strand at 324.166 kb on + strand at 324.166 kb on + strand at 324.167 kb on - strand at 324.167 kb on - strand at 324.167 kb on - strand at 324.172 kb on + strand at 324.173 kb on - strand at 324.194 kb on - strand at 324.194 kb on - strand at 324.194 kb on - strand at 324.314 kb on + strand at 324.315 kb on - strand at 324.389 kb on + strand, within GFF1669 at 324.390 kb on - strand, within GFF1669 at 324.390 kb on - strand, within GFF1669 at 324.395 kb on + strand, within GFF1669 at 324.395 kb on + strand, within GFF1669 at 324.395 kb on + strand, within GFF1669 at 324.498 kb on - strand, within GFF1669 at 324.548 kb on + strand, within GFF1669 at 324.557 kb on + strand, within GFF1669 at 324.557 kb on + strand, within GFF1669 at 324.809 kb on + strand, within GFF1669 at 324.810 kb on - strand, within GFF1669 at 324.810 kb on - strand, within GFF1669 at 324.854 kb on + strand, within GFF1669 at 324.854 kb on + strand, within GFF1669 at 324.854 kb on + strand, within GFF1669 at 324.855 kb on - strand, within GFF1669 at 324.929 kb on + strand, within GFF1669 at 325.008 kb on - strand, within GFF1669
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 322,613 + GFF1667 0.17 +0.2 322,614 - GFF1667 0.17 +0.4 322,614 - GFF1667 0.17 -0.6 322,646 + GFF1667 0.20 -0.6 322,775 + GFF1667 0.31 +0.5 322,775 + GFF1667 0.31 +0.0 322,776 - GFF1667 0.31 -0.1 322,776 - GFF1667 0.31 -0.5 322,776 - GFF1667 0.31 +0.5 323,127 + GFF1667 0.61 +0.0 323,127 + GFF1667 0.61 +0.7 323,129 + GFF1667 0.61 +0.6 323,129 + GFF1667 0.61 +0.7 323,130 - GFF1667 0.61 +0.7 323,387 + GFF1667 0.83 +0.4 323,387 + GFF1667 0.83 +1.1 323,477 + -1.1 323,477 + +0.3 323,477 + +0.4 323,478 - +0.7 323,513 + +1.0 323,668 + GFF1668 0.13 -0.4 323,668 + GFF1668 0.13 -0.9 323,668 + GFF1668 0.13 -0.2 323,669 - GFF1668 0.13 +0.8 323,689 + GFF1668 0.16 +1.2 323,689 + GFF1668 0.16 +0.3 323,689 + GFF1668 0.16 +0.2 323,689 + GFF1668 0.16 +1.2 323,689 + GFF1668 0.16 +1.4 323,689 + GFF1668 0.16 -0.8 323,690 - GFF1668 0.17 +0.1 323,690 - GFF1668 0.17 +0.4 323,690 - GFF1668 0.17 +0.5 323,690 - GFF1668 0.17 -0.4 323,885 + GFF1668 0.48 +0.8 323,886 - GFF1668 0.48 +0.4 324,028 + GFF1668 0.70 -1.0 324,166 + +0.3 324,166 + +0.5 324,166 + -0.6 324,166 + +1.0 324,166 + -0.7 324,167 - -0.5 324,167 - +0.0 324,167 - +0.0 324,172 + +0.0 324,173 - +0.0 324,194 - +0.3 324,194 - -0.8 324,194 - +0.3 324,314 + -0.1 324,315 - +0.7 324,389 + GFF1669 0.18 -0.3 324,390 - GFF1669 0.18 +0.2 324,390 - GFF1669 0.18 +0.4 324,395 + GFF1669 0.19 +0.1 324,395 + GFF1669 0.19 +0.3 324,395 + GFF1669 0.19 -0.1 324,498 - GFF1669 0.30 -0.5 324,548 + GFF1669 0.36 +0.7 324,557 + GFF1669 0.37 +0.7 324,557 + GFF1669 0.37 +0.4 324,809 + GFF1669 0.66 -0.2 324,810 - GFF1669 0.67 -0.1 324,810 - GFF1669 0.67 -0.5 324,854 + GFF1669 0.72 -0.0 324,854 + GFF1669 0.72 +0.2 324,854 + GFF1669 0.72 +0.2 324,855 - GFF1669 0.72 -0.1 324,929 + GFF1669 0.80 +0.7 325,008 - GFF1669 0.89 -1.4
Or see this region's nucleotide sequence