Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF1625 and GFF1626 are separated by 36 nucleotides GFF1626 and GFF1627 are separated by 446 nucleotides GFF1627 and GFF1628 are separated by 67 nucleotides
GFF1625 - hypothetical protein, at 274,487 to 275,074
GFF1625
GFF1626 - hypothetical protein, at 275,111 to 275,653
GFF1626
GFF1627 - hypothetical protein, at 276,100 to 276,327
GFF1627
GFF1628 - hypothetical protein, at 276,395 to 276,988
GFF1628
Position (kb) 275
276 Strain fitness (log2 ratio) -2
-1
0
1 at 274.641 kb on - strand, within GFF1625 at 274.641 kb on - strand, within GFF1625 at 274.641 kb on - strand, within GFF1625 at 274.730 kb on + strand, within GFF1625 at 274.731 kb on - strand, within GFF1625 at 274.789 kb on - strand, within GFF1625 at 274.789 kb on - strand, within GFF1625 at 274.856 kb on + strand, within GFF1625 at 274.856 kb on + strand, within GFF1625 at 274.857 kb on - strand, within GFF1625 at 274.857 kb on - strand, within GFF1625 at 274.857 kb on - strand, within GFF1625 at 274.883 kb on + strand, within GFF1625 at 274.883 kb on + strand, within GFF1625 at 274.948 kb on + strand, within GFF1625 at 275.031 kb on + strand at 275.072 kb on + strand at 275.073 kb on - strand at 275.073 kb on - strand at 275.073 kb on - strand at 275.075 kb on + strand at 275.137 kb on - strand at 275.257 kb on + strand, within GFF1626 at 275.278 kb on + strand, within GFF1626 at 275.279 kb on - strand, within GFF1626 at 275.298 kb on - strand, within GFF1626 at 275.369 kb on + strand, within GFF1626 at 275.369 kb on + strand, within GFF1626 at 275.370 kb on - strand, within GFF1626 at 275.370 kb on - strand, within GFF1626 at 275.370 kb on - strand, within GFF1626 at 275.370 kb on - strand, within GFF1626 at 275.418 kb on + strand, within GFF1626 at 275.419 kb on - strand, within GFF1626 at 275.419 kb on - strand, within GFF1626 at 275.482 kb on + strand, within GFF1626 at 275.483 kb on - strand, within GFF1626 at 275.627 kb on - strand at 275.627 kb on - strand at 275.832 kb on - strand at 276.061 kb on + strand at 276.100 kb on - strand at 276.100 kb on - strand at 276.100 kb on - strand at 276.122 kb on + strand at 276.423 kb on - strand at 276.423 kb on - strand at 276.423 kb on - strand at 276.449 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 274,641 - GFF1625 0.26 +0.6 274,641 - GFF1625 0.26 +0.2 274,641 - GFF1625 0.26 +1.2 274,730 + GFF1625 0.41 +0.2 274,731 - GFF1625 0.41 -0.5 274,789 - GFF1625 0.51 +1.1 274,789 - GFF1625 0.51 +0.2 274,856 + GFF1625 0.63 -0.2 274,856 + GFF1625 0.63 -0.6 274,857 - GFF1625 0.63 +0.5 274,857 - GFF1625 0.63 -0.5 274,857 - GFF1625 0.63 -0.1 274,883 + GFF1625 0.67 -0.3 274,883 + GFF1625 0.67 +0.2 274,948 + GFF1625 0.78 +0.6 275,031 + -0.0 275,072 + -0.2 275,073 - -0.4 275,073 - +0.8 275,073 - +0.3 275,075 + +0.2 275,137 - -0.4 275,257 + GFF1626 0.27 +0.7 275,278 + GFF1626 0.31 -0.1 275,279 - GFF1626 0.31 -0.6 275,298 - GFF1626 0.34 +0.4 275,369 + GFF1626 0.48 +0.0 275,369 + GFF1626 0.48 -0.4 275,370 - GFF1626 0.48 +0.0 275,370 - GFF1626 0.48 +1.1 275,370 - GFF1626 0.48 +0.4 275,370 - GFF1626 0.48 +0.1 275,418 + GFF1626 0.57 +0.4 275,419 - GFF1626 0.57 -1.9 275,419 - GFF1626 0.57 +0.1 275,482 + GFF1626 0.68 +0.2 275,483 - GFF1626 0.69 +0.1 275,627 - +1.2 275,627 - +1.0 275,832 - +0.1 276,061 + -0.1 276,100 - +0.2 276,100 - -0.2 276,100 - -0.1 276,122 + -0.2 276,423 - -0.2 276,423 - +0.2 276,423 - -0.2 276,449 + -0.0
Or see this region's nucleotide sequence