Experiment: Kanamycin sulfate stress 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS15480 and ABZR88_RS15485 are separated by 86 nucleotides ABZR88_RS15485 and ABZR88_RS15490 overlap by 4 nucleotides ABZR88_RS15490 and ABZR88_RS15495 are separated by 239 nucleotides
ABZR88_RS15480: ABZR88_RS15480 - enoyl-CoA hydratase/isomerase family protein, at 3,829,496 to 3,830,272
_RS15480
ABZR88_RS15485: ABZR88_RS15485 - chaperone modulator CbpM, at 3,830,359 to 3,830,655
_RS15485
ABZR88_RS15490: ABZR88_RS15490 - DnaJ C-terminal domain-containing protein, at 3,830,652 to 3,831,572
_RS15490
ABZR88_RS15495: ABZR88_RS15495 - acetylornithine carbamoyltransferase, at 3,831,812 to 3,832,759
_RS15495
Position (kb)
3830
3831
3832 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3829.789 kb on + strand, within ABZR88_RS15480 at 3829.789 kb on + strand, within ABZR88_RS15480 at 3829.819 kb on - strand, within ABZR88_RS15480 at 3829.895 kb on + strand, within ABZR88_RS15480 at 3829.895 kb on - strand, within ABZR88_RS15480 at 3829.895 kb on - strand, within ABZR88_RS15480 at 3829.895 kb on - strand, within ABZR88_RS15480 at 3830.054 kb on + strand, within ABZR88_RS15480 at 3830.245 kb on - strand at 3830.348 kb on + strand at 3830.380 kb on + strand at 3830.512 kb on + strand, within ABZR88_RS15485 at 3830.731 kb on - strand at 3830.811 kb on - strand, within ABZR88_RS15490 at 3830.899 kb on + strand, within ABZR88_RS15490 at 3830.900 kb on - strand, within ABZR88_RS15490 at 3830.908 kb on - strand, within ABZR88_RS15490 at 3830.908 kb on - strand, within ABZR88_RS15490 at 3830.908 kb on - strand, within ABZR88_RS15490 at 3831.055 kb on - strand, within ABZR88_RS15490 at 3831.145 kb on - strand, within ABZR88_RS15490 at 3831.288 kb on - strand, within ABZR88_RS15490 at 3831.586 kb on + strand at 3831.623 kb on - strand at 3831.715 kb on + strand at 3831.767 kb on + strand at 3831.785 kb on - strand at 3831.802 kb on - strand at 3831.954 kb on - strand, within ABZR88_RS15495 at 3832.251 kb on - strand, within ABZR88_RS15495 at 3832.490 kb on + strand, within ABZR88_RS15495
Per-strain Table
Position Strand Gene LocusTag Fraction Kanamycin sulfate stress 0.05 mg/ml remove 3,829,789 + ABZR88_RS15480 0.38 -1.3 3,829,789 + ABZR88_RS15480 0.38 +0.5 3,829,819 - ABZR88_RS15480 0.42 -0.6 3,829,895 + ABZR88_RS15480 0.51 -0.3 3,829,895 - ABZR88_RS15480 0.51 -2.0 3,829,895 - ABZR88_RS15480 0.51 -0.6 3,829,895 - ABZR88_RS15480 0.51 +0.2 3,830,054 + ABZR88_RS15480 0.72 +0.5 3,830,245 - -0.2 3,830,348 + +2.9 3,830,380 + -0.1 3,830,512 + ABZR88_RS15485 0.52 +0.1 3,830,731 - -0.4 3,830,811 - ABZR88_RS15490 0.17 +0.0 3,830,899 + ABZR88_RS15490 0.27 -0.5 3,830,900 - ABZR88_RS15490 0.27 -1.1 3,830,908 - ABZR88_RS15490 0.28 +0.0 3,830,908 - ABZR88_RS15490 0.28 -0.1 3,830,908 - ABZR88_RS15490 0.28 -0.9 3,831,055 - ABZR88_RS15490 0.44 -1.1 3,831,145 - ABZR88_RS15490 0.54 +0.6 3,831,288 - ABZR88_RS15490 0.69 -0.3 3,831,586 + +1.1 3,831,623 - +1.3 3,831,715 + -0.0 3,831,767 + -0.3 3,831,785 - -0.1 3,831,802 - +0.2 3,831,954 - ABZR88_RS15495 0.15 +0.3 3,832,251 - ABZR88_RS15495 0.46 -1.3 3,832,490 + ABZR88_RS15495 0.72 +0.9
Or see this region's nucleotide sequence