Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS10300

Experiment: Kanamycin sulfate stress 0.05 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS10295 and ABZR88_RS10300 are separated by 125 nucleotidesABZR88_RS10300 and ABZR88_RS10305 are separated by 177 nucleotides ABZR88_RS10295: ABZR88_RS10295 - aldo/keto reductase, at 2,532,277 to 2,533,227 _RS10295 ABZR88_RS10300: ABZR88_RS10300 - DUF1801 domain-containing protein, at 2,533,353 to 2,533,778 _RS10300 ABZR88_RS10305: ABZR88_RS10305 - thioredoxin-disulfide reductase, at 2,533,956 to 2,534,912 _RS10305 Position (kb) 2533 2534Strain fitness (log2 ratio) -2 -1 0 1at 2532.395 kb on + strand, within ABZR88_RS10295at 2532.435 kb on + strand, within ABZR88_RS10295at 2532.521 kb on + strand, within ABZR88_RS10295at 2532.525 kb on - strand, within ABZR88_RS10295at 2532.629 kb on - strand, within ABZR88_RS10295at 2532.704 kb on + strand, within ABZR88_RS10295at 2532.828 kb on + strand, within ABZR88_RS10295at 2532.834 kb on - strand, within ABZR88_RS10295at 2533.034 kb on + strand, within ABZR88_RS10295at 2533.035 kb on - strand, within ABZR88_RS10295at 2533.099 kb on - strand, within ABZR88_RS10295at 2533.099 kb on - strand, within ABZR88_RS10295at 2533.148 kb on + strandat 2533.284 kb on - strandat 2533.521 kb on + strand, within ABZR88_RS10300at 2533.567 kb on + strand, within ABZR88_RS10300at 2533.624 kb on - strand, within ABZR88_RS10300at 2533.668 kb on - strand, within ABZR88_RS10300at 2533.687 kb on - strand, within ABZR88_RS10300at 2533.688 kb on + strand, within ABZR88_RS10300at 2533.692 kb on - strand, within ABZR88_RS10300at 2533.724 kb on - strand, within ABZR88_RS10300at 2533.724 kb on - strand, within ABZR88_RS10300at 2533.753 kb on - strandat 2533.754 kb on + strandat 2533.780 kb on + strandat 2533.914 kb on - strandat 2533.939 kb on + strandat 2533.963 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Kanamycin sulfate stress 0.05 mg/ml
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2,532,395 + ABZR88_RS10295 0.12 -0.6
2,532,435 + ABZR88_RS10295 0.17 -0.2
2,532,521 + ABZR88_RS10295 0.26 -0.4
2,532,525 - ABZR88_RS10295 0.26 +0.1
2,532,629 - ABZR88_RS10295 0.37 +0.2
2,532,704 + ABZR88_RS10295 0.45 -0.1
2,532,828 + ABZR88_RS10295 0.58 -0.1
2,532,834 - ABZR88_RS10295 0.59 +0.2
2,533,034 + ABZR88_RS10295 0.80 +0.1
2,533,035 - ABZR88_RS10295 0.80 +0.0
2,533,099 - ABZR88_RS10295 0.86 +0.0
2,533,099 - ABZR88_RS10295 0.86 +0.6
2,533,148 + -0.1
2,533,284 - -0.6
2,533,521 + ABZR88_RS10300 0.39 -1.9
2,533,567 + ABZR88_RS10300 0.50 -0.1
2,533,624 - ABZR88_RS10300 0.64 +0.1
2,533,668 - ABZR88_RS10300 0.74 -0.1
2,533,687 - ABZR88_RS10300 0.78 -0.3
2,533,688 + ABZR88_RS10300 0.79 -0.2
2,533,692 - ABZR88_RS10300 0.80 -0.7
2,533,724 - ABZR88_RS10300 0.87 -0.1
2,533,724 - ABZR88_RS10300 0.87 +0.2
2,533,753 - -0.3
2,533,754 + -0.6
2,533,780 + -0.0
2,533,914 - -0.2
2,533,939 + -0.6
2,533,963 - +0.5

Or see this region's nucleotide sequence