Experiment: Kanamycin sulfate stress 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS09885 and ABZR88_RS09890 are separated by 96 nucleotides ABZR88_RS09890 and ABZR88_RS09895 are separated by 19 nucleotides ABZR88_RS09895 and ABZR88_RS09900 are separated by 121 nucleotides ABZR88_RS09900 and ABZR88_RS09905 are separated by 89 nucleotides
ABZR88_RS09885: ABZR88_RS09885 - hypothetical protein, at 2,456,894 to 2,457,181
_RS09885
ABZR88_RS09890: ABZR88_RS09890 - HAD family hydrolase, at 2,457,278 to 2,457,925
_RS09890
ABZR88_RS09895: ABZR88_RS09895 - riboflavin synthase, at 2,457,945 to 2,458,529
_RS09895
ABZR88_RS09900: ABZR88_RS09900 - SRPBCC domain-containing protein, at 2,458,651 to 2,459,151
_RS09900
ABZR88_RS09905: ABZR88_RS09905 - NUDIX domain-containing protein, at 2,459,241 to 2,459,702
_RS09905
Position (kb)
2457
2458
2459 Strain fitness (log2 ratio)
-1
0
1 at 2456.996 kb on - strand, within ABZR88_RS09885 at 2457.074 kb on + strand, within ABZR88_RS09885 at 2457.182 kb on - strand at 2457.182 kb on - strand at 2457.228 kb on + strand at 2457.288 kb on - strand at 2457.455 kb on + strand, within ABZR88_RS09890 at 2457.515 kb on - strand, within ABZR88_RS09890 at 2457.515 kb on - strand, within ABZR88_RS09890 at 2457.608 kb on - strand, within ABZR88_RS09890 at 2457.623 kb on + strand, within ABZR88_RS09890 at 2457.666 kb on - strand, within ABZR88_RS09890 at 2457.716 kb on + strand, within ABZR88_RS09890 at 2457.720 kb on + strand, within ABZR88_RS09890 at 2457.799 kb on + strand, within ABZR88_RS09890 at 2457.800 kb on - strand, within ABZR88_RS09890 at 2457.860 kb on + strand, within ABZR88_RS09890 at 2458.594 kb on + strand at 2458.594 kb on + strand at 2458.611 kb on + strand at 2458.662 kb on + strand at 2458.699 kb on - strand at 2458.847 kb on + strand, within ABZR88_RS09900 at 2458.847 kb on + strand, within ABZR88_RS09900 at 2459.103 kb on - strand at 2459.230 kb on + strand at 2459.397 kb on - strand, within ABZR88_RS09905 at 2459.438 kb on + strand, within ABZR88_RS09905
Per-strain Table
Position Strand Gene LocusTag Fraction Kanamycin sulfate stress 0.05 mg/ml remove 2,456,996 - ABZR88_RS09885 0.35 +0.3 2,457,074 + ABZR88_RS09885 0.62 +0.4 2,457,182 - -0.1 2,457,182 - -0.8 2,457,228 + +0.3 2,457,288 - -0.1 2,457,455 + ABZR88_RS09890 0.27 +0.0 2,457,515 - ABZR88_RS09890 0.37 +0.7 2,457,515 - ABZR88_RS09890 0.37 -0.1 2,457,608 - ABZR88_RS09890 0.51 -0.9 2,457,623 + ABZR88_RS09890 0.53 +1.5 2,457,666 - ABZR88_RS09890 0.60 +0.1 2,457,716 + ABZR88_RS09890 0.68 +0.0 2,457,720 + ABZR88_RS09890 0.68 -0.2 2,457,799 + ABZR88_RS09890 0.80 +0.2 2,457,800 - ABZR88_RS09890 0.81 +0.6 2,457,860 + ABZR88_RS09890 0.90 -0.3 2,458,594 + +0.2 2,458,594 + -0.5 2,458,611 + +0.0 2,458,662 + +0.3 2,458,699 - +0.1 2,458,847 + ABZR88_RS09900 0.39 +0.3 2,458,847 + ABZR88_RS09900 0.39 +0.2 2,459,103 - -0.5 2,459,230 + +1.3 2,459,397 - ABZR88_RS09905 0.34 -0.3 2,459,438 + ABZR88_RS09905 0.43 -0.1
Or see this region's nucleotide sequence