Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS00320

Experiment: Quercetin stress 0.05 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS00315 and ABZR88_RS00320 are separated by 324 nucleotidesABZR88_RS00320 and ABZR88_RS00325 are separated by 8 nucleotides ABZR88_RS00315: ABZR88_RS00315 - TonB-dependent receptor, at 57,543 to 60,365 _RS00315 ABZR88_RS00320: ABZR88_RS00320 - ferrous iron transport protein A, at 60,690 to 60,905 _RS00320 ABZR88_RS00325: ABZR88_RS00325 - ferrous iron transport protein B, at 60,914 to 63,028 _RS00325 Position (kb) 60 61Strain fitness (log2 ratio) -1 0 1at 59.964 kb on - strand, within ABZR88_RS00315at 60.003 kb on + strand, within ABZR88_RS00315at 60.116 kb on + strandat 60.303 kb on + strandat 60.332 kb on + strandat 60.363 kb on + strandat 60.453 kb on + strandat 60.573 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Quercetin stress 0.05 mg/ml
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59,964 - ABZR88_RS00315 0.86 -0.1
60,003 + ABZR88_RS00315 0.87 -1.0
60,116 + -0.0
60,303 + -0.1
60,332 + -0.0
60,363 + +0.2
60,453 + -0.1
60,573 - -0.1

Or see this region's nucleotide sequence