Strain Fitness in Mucilaginibacter yixingensis YX-36 DSM 26809 around ABZR88_RS21470

Experiment: potassium fluoride stress 30 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR88_RS21465 and ABZR88_RS21470 are separated by 235 nucleotidesABZR88_RS21470 and ABZR88_RS21475 are separated by 23 nucleotidesABZR88_RS21475 and ABZR88_RS21480 overlap by 47 nucleotides ABZR88_RS21465: ABZR88_RS21465 - ATP-binding protein, at 5,155,731 to 5,156,867 _RS21465 ABZR88_RS21470: ABZR88_RS21470 - NEW3 domain-containing protein, at 5,157,103 to 5,157,954 _RS21470 ABZR88_RS21475: ABZR88_RS21475 - ABC transporter ATP-binding protein, at 5,157,978 to 5,158,925 _RS21475 ABZR88_RS21480: ABZR88_RS21480 - ABC transporter permease, at 5,158,879 to 5,159,883 _RS21480 Position (kb) 5157 5158Strain fitness (log2 ratio) -1 0 1at 5156.196 kb on + strand, within ABZR88_RS21465at 5156.244 kb on + strand, within ABZR88_RS21465at 5156.313 kb on - strand, within ABZR88_RS21465at 5156.501 kb on + strand, within ABZR88_RS21465at 5156.519 kb on + strand, within ABZR88_RS21465at 5156.613 kb on + strand, within ABZR88_RS21465at 5156.613 kb on + strand, within ABZR88_RS21465at 5156.870 kb on + strandat 5156.871 kb on - strandat 5157.097 kb on + strandat 5157.107 kb on + strandat 5157.282 kb on + strand, within ABZR88_RS21470at 5157.644 kb on + strand, within ABZR88_RS21470at 5157.645 kb on - strand, within ABZR88_RS21470at 5157.666 kb on + strand, within ABZR88_RS21470at 5157.844 kb on + strand, within ABZR88_RS21470at 5157.992 kb on + strandat 5157.995 kb on - strandat 5158.339 kb on + strand, within ABZR88_RS21475at 5158.472 kb on - strand, within ABZR88_RS21475at 5158.621 kb on + strand, within ABZR88_RS21475at 5158.678 kb on - strand, within ABZR88_RS21475at 5158.893 kb on - strandat 5158.897 kb on - strandat 5158.924 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction potassium fluoride stress 30 mM
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5,156,196 + ABZR88_RS21465 0.41 -0.3
5,156,244 + ABZR88_RS21465 0.45 +0.7
5,156,313 - ABZR88_RS21465 0.51 +0.7
5,156,501 + ABZR88_RS21465 0.68 +0.1
5,156,519 + ABZR88_RS21465 0.69 +0.5
5,156,613 + ABZR88_RS21465 0.78 +0.3
5,156,613 + ABZR88_RS21465 0.78 -0.1
5,156,870 + -0.2
5,156,871 - -0.1
5,157,097 + -0.1
5,157,107 + -0.3
5,157,282 + ABZR88_RS21470 0.21 +0.2
5,157,644 + ABZR88_RS21470 0.63 +0.2
5,157,645 - ABZR88_RS21470 0.64 -0.7
5,157,666 + ABZR88_RS21470 0.66 -0.1
5,157,844 + ABZR88_RS21470 0.87 +0.5
5,157,992 + -0.1
5,157,995 - +0.2
5,158,339 + ABZR88_RS21475 0.38 +0.8
5,158,472 - ABZR88_RS21475 0.52 +0.8
5,158,621 + ABZR88_RS21475 0.68 -0.1
5,158,678 - ABZR88_RS21475 0.74 +0.9
5,158,893 - -0.1
5,158,897 - -0.3
5,158,924 - -0.1

Or see this region's nucleotide sequence