Experiment: potassium fluoride stress 30 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS02750 and ABZR88_RS02755 are separated by 95 nucleotides ABZR88_RS02755 and ABZR88_RS02760 overlap by 4 nucleotides ABZR88_RS02760 and ABZR88_RS02765 are separated by 73 nucleotides ABZR88_RS02765 and ABZR88_RS02770 are separated by 87 nucleotides
ABZR88_RS02750: ABZR88_RS02750 - 3-hydroxyacyl-CoA dehydrogenase family protein, at 647,831 to 648,727
_RS02750
ABZR88_RS02755: ABZR88_RS02755 - dethiobiotin synthase, at 648,823 to 649,458
_RS02755
ABZR88_RS02760: ABZR88_RS02760 - pyridoxal phosphate-dependent aminotransferase family protein, at 649,455 to 650,570
_RS02760
ABZR88_RS02765: ABZR88_RS02765 - periplasmic heavy metal sensor, at 650,644 to 651,057
_RS02765
ABZR88_RS02770: ABZR88_RS02770 - LexA family transcriptional regulator, at 651,145 to 651,924
_RS02770
Position (kb) 649
650
651 Strain fitness (log2 ratio) -1
0
1 at 648.604 kb on + strand, within ABZR88_RS02750 at 648.728 kb on - strand at 648.939 kb on - strand, within ABZR88_RS02755 at 649.108 kb on - strand, within ABZR88_RS02755 at 649.296 kb on + strand, within ABZR88_RS02755 at 649.297 kb on - strand, within ABZR88_RS02755 at 649.333 kb on - strand, within ABZR88_RS02755 at 649.333 kb on - strand, within ABZR88_RS02755 at 649.368 kb on - strand, within ABZR88_RS02755 at 649.473 kb on - strand at 649.508 kb on + strand at 649.509 kb on - strand at 649.815 kb on + strand, within ABZR88_RS02760 at 650.069 kb on - strand, within ABZR88_RS02760 at 650.073 kb on - strand, within ABZR88_RS02760 at 650.134 kb on - strand, within ABZR88_RS02760 at 650.147 kb on + strand, within ABZR88_RS02760 at 650.188 kb on - strand, within ABZR88_RS02760 at 650.624 kb on - strand at 651.037 kb on + strand at 651.105 kb on - strand at 651.128 kb on - strand at 651.129 kb on + strand at 651.151 kb on - strand at 651.151 kb on - strand at 651.176 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction potassium fluoride stress 30 mM remove 648,604 + ABZR88_RS02750 0.86 -1.2 648,728 - +0.1 648,939 - ABZR88_RS02755 0.18 +0.5 649,108 - ABZR88_RS02755 0.45 -0.3 649,296 + ABZR88_RS02755 0.74 -0.3 649,297 - ABZR88_RS02755 0.75 -0.2 649,333 - ABZR88_RS02755 0.80 -0.4 649,333 - ABZR88_RS02755 0.80 -0.2 649,368 - ABZR88_RS02755 0.86 -0.2 649,473 - +0.7 649,508 + -0.3 649,509 - -0.2 649,815 + ABZR88_RS02760 0.32 -0.1 650,069 - ABZR88_RS02760 0.55 -0.2 650,073 - ABZR88_RS02760 0.55 -0.3 650,134 - ABZR88_RS02760 0.61 -0.1 650,147 + ABZR88_RS02760 0.62 -0.3 650,188 - ABZR88_RS02760 0.66 +0.2 650,624 - +0.1 651,037 + -0.5 651,105 - +0.2 651,128 - -0.0 651,129 + -0.1 651,151 - -0.0 651,151 - -0.1 651,176 - +0.5
Or see this region's nucleotide sequence