Experiment: potassium fluoride stress 30 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS00210 and ABZR88_RS00215 are separated by 60 nucleotides ABZR88_RS00215 and ABZR88_RS00220 are separated by 34 nucleotides ABZR88_RS00220 and ABZR88_RS00225 are separated by 21 nucleotides
ABZR88_RS00210: ABZR88_RS00210 - carbon-nitrogen hydrolase family protein, at 34,883 to 35,680
_RS00210
ABZR88_RS00215: ABZR88_RS00215 - CoA-binding protein, at 35,741 to 36,106
_RS00215
ABZR88_RS00220: ABZR88_RS00220 - hypothetical protein, at 36,141 to 36,584
_RS00220
ABZR88_RS00225: ABZR88_RS00225 - RNA methyltransferase, at 36,606 to 37,982
_RS00225
Position (kb) 36
37 Strain fitness (log2 ratio) -2
-1
0
1 at 35.175 kb on + strand, within ABZR88_RS00210 at 35.365 kb on + strand, within ABZR88_RS00210 at 35.444 kb on + strand, within ABZR88_RS00210 at 35.483 kb on - strand, within ABZR88_RS00210 at 35.610 kb on + strand at 35.714 kb on + strand at 35.793 kb on - strand, within ABZR88_RS00215 at 35.813 kb on - strand, within ABZR88_RS00215 at 35.838 kb on + strand, within ABZR88_RS00215 at 35.931 kb on - strand, within ABZR88_RS00215 at 35.968 kb on + strand, within ABZR88_RS00215 at 35.968 kb on + strand, within ABZR88_RS00215 at 35.968 kb on + strand, within ABZR88_RS00215 at 35.969 kb on - strand, within ABZR88_RS00215 at 35.972 kb on - strand, within ABZR88_RS00215 at 36.066 kb on - strand, within ABZR88_RS00215 at 36.171 kb on - strand at 36.258 kb on - strand, within ABZR88_RS00220 at 36.488 kb on + strand, within ABZR88_RS00220 at 36.768 kb on - strand, within ABZR88_RS00225 at 36.768 kb on - strand, within ABZR88_RS00225 at 36.901 kb on + strand, within ABZR88_RS00225 at 37.004 kb on + strand, within ABZR88_RS00225 at 37.005 kb on - strand, within ABZR88_RS00225 at 37.229 kb on + strand, within ABZR88_RS00225 at 37.293 kb on - strand, within ABZR88_RS00225 at 37.302 kb on + strand, within ABZR88_RS00225 at 37.306 kb on + strand, within ABZR88_RS00225 at 37.383 kb on + strand, within ABZR88_RS00225
Per-strain Table
Position Strand Gene LocusTag Fraction potassium fluoride stress 30 mM remove 35,175 + ABZR88_RS00210 0.37 +0.4 35,365 + ABZR88_RS00210 0.60 -1.8 35,444 + ABZR88_RS00210 0.70 +0.1 35,483 - ABZR88_RS00210 0.75 +0.3 35,610 + -0.1 35,714 + -0.0 35,793 - ABZR88_RS00215 0.14 -0.5 35,813 - ABZR88_RS00215 0.20 -0.2 35,838 + ABZR88_RS00215 0.27 -0.0 35,931 - ABZR88_RS00215 0.52 -0.1 35,968 + ABZR88_RS00215 0.62 -0.3 35,968 + ABZR88_RS00215 0.62 +0.3 35,968 + ABZR88_RS00215 0.62 +0.1 35,969 - ABZR88_RS00215 0.62 -0.1 35,972 - ABZR88_RS00215 0.63 +0.2 36,066 - ABZR88_RS00215 0.89 -0.5 36,171 - +0.2 36,258 - ABZR88_RS00220 0.26 +0.0 36,488 + ABZR88_RS00220 0.78 +0.0 36,768 - ABZR88_RS00225 0.12 +0.3 36,768 - ABZR88_RS00225 0.12 +0.3 36,901 + ABZR88_RS00225 0.21 +0.4 37,004 + ABZR88_RS00225 0.29 +0.5 37,005 - ABZR88_RS00225 0.29 +0.6 37,229 + ABZR88_RS00225 0.45 +0.5 37,293 - ABZR88_RS00225 0.50 +0.3 37,302 + ABZR88_RS00225 0.51 -0.6 37,306 + ABZR88_RS00225 0.51 +0.5 37,383 + ABZR88_RS00225 0.56 +0.6
Or see this region's nucleotide sequence