Experiment: NaCl stress 100 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR88_RS05895 and ABZR88_RS05900 are separated by 199 nucleotides ABZR88_RS05900 and ABZR88_RS05905 are separated by 227 nucleotides ABZR88_RS05905 and ABZR88_RS05910 are separated by 18 nucleotides ABZR88_RS05910 and ABZR88_RS05915 are separated by 185 nucleotides
ABZR88_RS05895: ABZR88_RS05895 - helix-turn-helix domain-containing protein, at 1,437,594 to 1,437,920
_RS05895
ABZR88_RS05900: ABZR88_RS05900 - hypothetical protein, at 1,438,120 to 1,438,506
_RS05900
ABZR88_RS05905: ABZR88_RS05905 - MFS transporter, at 1,438,734 to 1,440,053
_RS05905
ABZR88_RS05910: ABZR88_RS05910 - (Fe-S)-binding protein, at 1,440,072 to 1,440,800
_RS05910
ABZR88_RS05915: ABZR88_RS05915 - hypothetical protein, at 1,440,986 to 1,441,315
_RS05915
Position (kb) 1438
1439
1440
1441 Strain fitness (log2 ratio) -1
0
1 at 1437.875 kb on + strand, within ABZR88_RS05895 at 1437.909 kb on - strand at 1437.930 kb on - strand at 1438.074 kb on - strand at 1438.244 kb on - strand, within ABZR88_RS05900 at 1438.315 kb on - strand, within ABZR88_RS05900 at 1438.457 kb on - strand, within ABZR88_RS05900 at 1438.600 kb on + strand at 1438.734 kb on - strand at 1438.801 kb on - strand at 1439.107 kb on + strand, within ABZR88_RS05905 at 1439.174 kb on - strand, within ABZR88_RS05905 at 1439.404 kb on - strand, within ABZR88_RS05905 at 1439.516 kb on - strand, within ABZR88_RS05905 at 1439.641 kb on - strand, within ABZR88_RS05905 at 1439.663 kb on + strand, within ABZR88_RS05905 at 1439.759 kb on - strand, within ABZR88_RS05905 at 1439.818 kb on - strand, within ABZR88_RS05905 at 1439.890 kb on + strand, within ABZR88_RS05905 at 1439.918 kb on - strand, within ABZR88_RS05905 at 1439.918 kb on - strand, within ABZR88_RS05905 at 1440.051 kb on + strand at 1440.090 kb on - strand at 1440.090 kb on - strand at 1440.174 kb on + strand, within ABZR88_RS05910 at 1440.467 kb on - strand, within ABZR88_RS05910 at 1440.678 kb on + strand, within ABZR88_RS05910 at 1440.681 kb on - strand, within ABZR88_RS05910 at 1440.690 kb on - strand, within ABZR88_RS05910 at 1440.726 kb on - strand, within ABZR88_RS05910 at 1440.772 kb on + strand at 1440.828 kb on - strand at 1440.828 kb on - strand at 1440.828 kb on - strand at 1440.832 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NaCl stress 100 mM remove 1,437,875 + ABZR88_RS05895 0.86 -0.2 1,437,909 - -0.1 1,437,930 - -0.0 1,438,074 - +1.1 1,438,244 - ABZR88_RS05900 0.32 +0.3 1,438,315 - ABZR88_RS05900 0.50 +0.2 1,438,457 - ABZR88_RS05900 0.87 +0.1 1,438,600 + +0.0 1,438,734 - +0.3 1,438,801 - +0.3 1,439,107 + ABZR88_RS05905 0.28 -0.3 1,439,174 - ABZR88_RS05905 0.33 +0.1 1,439,404 - ABZR88_RS05905 0.51 +1.3 1,439,516 - ABZR88_RS05905 0.59 +0.4 1,439,641 - ABZR88_RS05905 0.69 +0.1 1,439,663 + ABZR88_RS05905 0.70 -0.2 1,439,759 - ABZR88_RS05905 0.78 +0.2 1,439,818 - ABZR88_RS05905 0.82 -0.3 1,439,890 + ABZR88_RS05905 0.88 -0.1 1,439,918 - ABZR88_RS05905 0.90 +0.1 1,439,918 - ABZR88_RS05905 0.90 +0.1 1,440,051 + -0.1 1,440,090 - -0.5 1,440,090 - +0.2 1,440,174 + ABZR88_RS05910 0.14 +0.3 1,440,467 - ABZR88_RS05910 0.54 +0.0 1,440,678 + ABZR88_RS05910 0.83 +0.1 1,440,681 - ABZR88_RS05910 0.84 -0.1 1,440,690 - ABZR88_RS05910 0.85 -0.6 1,440,726 - ABZR88_RS05910 0.90 -0.4 1,440,772 + +0.1 1,440,828 - -0.2 1,440,828 - -0.3 1,440,828 - +0.4 1,440,832 - +0.1
Or see this region's nucleotide sequence