Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06458 and MPMX19_06459 are separated by 264 nucleotides
MPMX19_06458: MPMX19_06458 - hypothetical protein, at 234,166 to 238,191
_06458
MPMX19_06459: MPMX19_06459 - hypothetical protein, at 238,456 to 239,355
_06459
Position (kb) 238
239
240 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 237.638 kb on + strand, within MPMX19_06458 at 237.638 kb on + strand, within MPMX19_06458 at 237.639 kb on - strand, within MPMX19_06458 at 237.639 kb on - strand, within MPMX19_06458 at 237.639 kb on - strand, within MPMX19_06458 at 237.639 kb on - strand, within MPMX19_06458 at 237.639 kb on - strand, within MPMX19_06458 at 237.812 kb on - strand at 237.812 kb on - strand at 237.812 kb on - strand at 237.812 kb on - strand at 237.812 kb on - strand at 238.010 kb on + strand at 238.011 kb on - strand at 238.011 kb on - strand at 238.011 kb on - strand at 238.133 kb on + strand at 238.133 kb on + strand at 238.134 kb on - strand at 238.215 kb on + strand at 238.216 kb on - strand at 238.216 kb on - strand at 238.220 kb on + strand at 238.221 kb on - strand at 238.232 kb on - strand at 238.232 kb on - strand at 238.232 kb on - strand at 238.303 kb on + strand at 238.303 kb on + strand at 238.304 kb on - strand at 238.412 kb on + strand at 238.412 kb on + strand at 238.412 kb on + strand at 238.412 kb on + strand at 238.412 kb on + strand at 238.413 kb on - strand at 238.413 kb on - strand at 238.413 kb on - strand at 238.474 kb on + strand at 238.474 kb on + strand at 238.474 kb on + strand at 238.474 kb on + strand at 238.474 kb on + strand at 238.475 kb on - strand at 238.475 kb on - strand at 238.475 kb on - strand at 238.475 kb on - strand at 238.475 kb on - strand at 238.835 kb on + strand, within MPMX19_06459 at 238.835 kb on + strand, within MPMX19_06459 at 238.835 kb on + strand, within MPMX19_06459 at 238.836 kb on - strand, within MPMX19_06459 at 238.836 kb on - strand, within MPMX19_06459 at 238.836 kb on - strand, within MPMX19_06459 at 238.836 kb on - strand, within MPMX19_06459 at 238.836 kb on - strand, within MPMX19_06459 at 238.836 kb on - strand, within MPMX19_06459 at 238.836 kb on - strand, within MPMX19_06459 at 238.836 kb on - strand, within MPMX19_06459 at 238.995 kb on + strand, within MPMX19_06459 at 239.042 kb on + strand, within MPMX19_06459 at 239.042 kb on + strand, within MPMX19_06459 at 239.042 kb on + strand, within MPMX19_06459 at 239.042 kb on + strand, within MPMX19_06459 at 239.042 kb on + strand, within MPMX19_06459 at 239.042 kb on + strand, within MPMX19_06459 at 239.043 kb on - strand, within MPMX19_06459 at 239.043 kb on - strand, within MPMX19_06459 at 239.043 kb on - strand, within MPMX19_06459 at 239.043 kb on - strand, within MPMX19_06459 at 239.043 kb on - strand, within MPMX19_06459 at 239.043 kb on - strand, within MPMX19_06459 at 239.043 kb on - strand, within MPMX19_06459 at 239.107 kb on - strand, within MPMX19_06459 at 239.120 kb on + strand, within MPMX19_06459 at 239.183 kb on + strand, within MPMX19_06459 at 239.183 kb on + strand, within MPMX19_06459 at 239.184 kb on - strand, within MPMX19_06459 at 239.184 kb on - strand, within MPMX19_06459 at 239.184 kb on - strand, within MPMX19_06459 at 239.184 kb on - strand, within MPMX19_06459 at 239.184 kb on - strand, within MPMX19_06459 at 239.342 kb on + strand at 239.342 kb on + strand at 239.343 kb on - strand at 239.343 kb on - strand at 239.437 kb on + strand at 239.437 kb on + strand at 239.437 kb on + strand at 239.437 kb on + strand at 239.438 kb on - strand at 239.438 kb on - strand at 239.497 kb on - strand at 239.497 kb on - strand at 239.639 kb on + strand at 239.639 kb on + strand at 239.639 kb on + strand at 239.640 kb on - strand at 239.704 kb on + strand at 239.704 kb on + strand at 239.704 kb on + strand at 239.704 kb on + strand at 239.705 kb on - strand at 239.705 kb on - strand at 239.705 kb on - strand at 239.705 kb on - strand at 239.726 kb on - strand at 239.739 kb on + strand at 239.739 kb on + strand at 239.740 kb on - strand at 239.850 kb on + strand at 239.902 kb on + strand at 239.902 kb on + strand at 239.902 kb on + strand at 239.902 kb on + strand at 239.903 kb on - strand at 239.903 kb on - strand at 239.903 kb on - strand at 239.903 kb on - strand at 239.903 kb on - strand at 240.007 kb on + strand at 240.007 kb on + strand at 240.007 kb on + strand at 240.008 kb on - strand at 240.008 kb on - strand at 240.008 kb on - strand at 240.008 kb on - strand at 240.008 kb on - strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.077 kb on + strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.078 kb on - strand at 240.325 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 237,638 + MPMX19_06458 0.86 -0.4 237,638 + MPMX19_06458 0.86 -0.8 237,639 - MPMX19_06458 0.86 -0.1 237,639 - MPMX19_06458 0.86 -1.7 237,639 - MPMX19_06458 0.86 -1.3 237,639 - MPMX19_06458 0.86 -2.1 237,639 - MPMX19_06458 0.86 +0.6 237,812 - -1.7 237,812 - -0.5 237,812 - +0.1 237,812 - -0.5 237,812 - -0.4 238,010 + -0.8 238,011 - +0.4 238,011 - -0.3 238,011 - -0.8 238,133 + +0.7 238,133 + +0.2 238,134 - +0.5 238,215 + -2.3 238,216 - -0.1 238,216 - +0.6 238,220 + +0.3 238,221 - +0.6 238,232 - -2.2 238,232 - -1.4 238,232 - +1.0 238,303 + +1.3 238,303 + +0.7 238,304 - -0.5 238,412 + -0.7 238,412 + +0.2 238,412 + +0.3 238,412 + -0.6 238,412 + +0.7 238,413 - -1.0 238,413 - -0.8 238,413 - +0.7 238,474 + -0.1 238,474 + +0.1 238,474 + +0.0 238,474 + +1.7 238,474 + -0.8 238,475 - -0.4 238,475 - -0.5 238,475 - +1.7 238,475 - -0.8 238,475 - +3.1 238,835 + MPMX19_06459 0.42 -2.2 238,835 + MPMX19_06459 0.42 -0.9 238,835 + MPMX19_06459 0.42 +0.8 238,836 - MPMX19_06459 0.42 -0.6 238,836 - MPMX19_06459 0.42 -0.5 238,836 - MPMX19_06459 0.42 +2.5 238,836 - MPMX19_06459 0.42 -0.4 238,836 - MPMX19_06459 0.42 -0.2 238,836 - MPMX19_06459 0.42 -0.1 238,836 - MPMX19_06459 0.42 +0.4 238,836 - MPMX19_06459 0.42 +0.3 238,995 + MPMX19_06459 0.60 +0.2 239,042 + MPMX19_06459 0.65 +0.1 239,042 + MPMX19_06459 0.65 +1.2 239,042 + MPMX19_06459 0.65 +0.5 239,042 + MPMX19_06459 0.65 -0.9 239,042 + MPMX19_06459 0.65 -0.0 239,042 + MPMX19_06459 0.65 +0.0 239,043 - MPMX19_06459 0.65 +0.3 239,043 - MPMX19_06459 0.65 +0.1 239,043 - MPMX19_06459 0.65 +2.2 239,043 - MPMX19_06459 0.65 -1.5 239,043 - MPMX19_06459 0.65 +0.1 239,043 - MPMX19_06459 0.65 -2.5 239,043 - MPMX19_06459 0.65 +0.0 239,107 - MPMX19_06459 0.72 -1.7 239,120 + MPMX19_06459 0.74 +0.5 239,183 + MPMX19_06459 0.81 -0.0 239,183 + MPMX19_06459 0.81 -2.2 239,184 - MPMX19_06459 0.81 +0.6 239,184 - MPMX19_06459 0.81 +0.3 239,184 - MPMX19_06459 0.81 -1.0 239,184 - MPMX19_06459 0.81 -0.1 239,184 - MPMX19_06459 0.81 -0.8 239,342 + -0.4 239,342 + +0.3 239,343 - +0.3 239,343 - +0.9 239,437 + -0.8 239,437 + +0.5 239,437 + +0.2 239,437 + -0.5 239,438 - +0.2 239,438 - -0.1 239,497 - +0.6 239,497 - -0.2 239,639 + -1.0 239,639 + +0.1 239,639 + +0.5 239,640 - -0.6 239,704 + -1.0 239,704 + -0.5 239,704 + -0.8 239,704 + +0.3 239,705 - +0.3 239,705 - +0.9 239,705 - -0.2 239,705 - +0.1 239,726 - -1.5 239,739 + -1.5 239,739 + -0.1 239,740 - +1.0 239,850 + -1.8 239,902 + -1.3 239,902 + +0.1 239,902 + -0.0 239,902 + -2.8 239,903 - +0.0 239,903 - -0.5 239,903 - +0.6 239,903 - +1.5 239,903 - +0.3 240,007 + +0.9 240,007 + -0.6 240,007 + -1.7 240,008 - -0.0 240,008 - +0.3 240,008 - +0.9 240,008 - -0.9 240,008 - -1.0 240,077 + +1.5 240,077 + +0.5 240,077 + -0.7 240,077 + -1.1 240,077 + +0.0 240,077 + +0.7 240,077 + +1.5 240,077 + -0.1 240,077 + -1.3 240,077 + -0.3 240,077 + +0.5 240,077 + +1.1 240,077 + +0.8 240,077 + -0.5 240,077 + -1.3 240,077 + +0.5 240,077 + +2.2 240,077 + +1.3 240,077 + -2.6 240,077 + +0.5 240,077 + +0.5 240,077 + -1.5 240,077 + -2.0 240,077 + -1.1 240,077 + -0.7 240,077 + +0.3 240,078 - +0.7 240,078 - -1.0 240,078 - +0.5 240,078 - -1.5 240,078 - +0.3 240,078 - +1.5 240,078 - -0.8 240,078 - -0.1 240,078 - -0.9 240,078 - -0.1 240,078 - -0.4 240,078 - -0.1 240,078 - +0.5 240,078 - -0.5 240,078 - -1.3 240,078 - -0.4 240,078 - -0.4 240,078 - +1.3 240,078 - -1.2 240,078 - -0.4 240,078 - +0.6 240,078 - +0.7 240,325 - +0.3
Or see this region's nucleotide sequence