Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05959

Experiment: NL-CCM; spin-x control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; spin-x control
106,912	+		MPMX19_05958	0.51	+0.1
106,912	+		MPMX19_05958	0.51	-0.5
106,912	+		MPMX19_05958	0.51	-1.0
106,912	+		MPMX19_05958	0.51	-0.2
106,912	+		MPMX19_05958	0.51	-2.3
106,912	+		MPMX19_05958	0.51	+0.5
106,912	+		MPMX19_05958	0.51	+0.2
106,912	+		MPMX19_05958	0.51	-0.9
106,912	+		MPMX19_05958	0.51	-1.2
106,912	+		MPMX19_05958	0.51	+0.1
106,912	+		MPMX19_05958	0.51	-0.2
106,912	+		MPMX19_05958	0.51	+0.3
106,912	+		MPMX19_05958	0.51	-0.4
106,912	+		MPMX19_05958	0.51	+0.4
106,913	-		MPMX19_05958	0.51	+0.5
106,913	-		MPMX19_05958	0.51	+0.5
106,913	-		MPMX19_05958	0.51	-1.6
106,913	-		MPMX19_05958	0.51	+0.1
106,913	-		MPMX19_05958	0.51	+1.6
106,913	-		MPMX19_05958	0.51	+0.8
106,913	-		MPMX19_05958	0.51	-0.9
106,913	-		MPMX19_05958	0.51	+0.7
106,913	-		MPMX19_05958	0.51	-2.0
106,913	-		MPMX19_05958	0.51	-0.6
106,987	+		MPMX19_05958	0.55	+0.2
106,987	+		MPMX19_05958	0.55	-1.3
106,987	+		MPMX19_05958	0.55	-0.0
106,988	-		MPMX19_05958	0.55	-0.3
106,988	-		MPMX19_05958	0.55	-0.2
106,988	-		MPMX19_05958	0.55	-2.4
107,008	+		MPMX19_05958	0.57	-0.9
107,008	+		MPMX19_05958	0.57	-0.7
107,008	+		MPMX19_05958	0.57	-0.3
107,134	+		MPMX19_05958	0.65	-0.6
107,134	+		MPMX19_05958	0.65	+0.6
107,134	+		MPMX19_05958	0.65	-1.4
107,135	-		MPMX19_05958	0.65	+0.1
107,135	-		MPMX19_05958	0.65	-0.3
107,368	+		MPMX19_05958	0.79	-2.3
107,368	+		MPMX19_05958	0.79	+0.5
107,368	+		MPMX19_05958	0.79	-1.0
107,368	+		MPMX19_05958	0.79	+0.3
107,368	+		MPMX19_05958	0.79	-2.6
107,368	+		MPMX19_05958	0.79	+0.9
107,368	+		MPMX19_05958	0.79	+0.3
107,368	+		MPMX19_05958	0.79	-0.3
107,368	+		MPMX19_05958	0.79	-0.2
107,368	+		MPMX19_05958	0.79	+0.3
107,368	+		MPMX19_05958	0.79	+0.0
107,368	+		MPMX19_05958	0.79	-0.6
107,368	+		MPMX19_05958	0.79	+0.3
107,368	+		MPMX19_05958	0.79	+0.8
107,369	-		MPMX19_05958	0.79	+0.2
107,369	-		MPMX19_05958	0.79	-0.9
107,381	-		MPMX19_05958	0.80	-1.4
107,608	+				+0.5
107,608	+				+1.0
107,609	-				-1.0
107,609	-				-2.4
107,695	+				-0.5
107,696	-				-0.1
107,696	-				-1.1
107,719	-				-0.6
107,727	+				-1.0
107,727	+				-1.5
107,727	+				+0.2
107,727	+				-0.6
107,728	-				+0.6
107,728	-				-0.1
107,728	-				+0.7
107,728	-				-1.6
107,728	-				-1.9
107,728	-				-0.9
107,728	-				+0.5
107,728	-				-2.0
107,733	+				-0.3
107,882	+				-0.9
107,882	+				+0.1
107,882	+				-1.2
107,882	+				-0.1
107,882	+				-0.5
107,882	+				-0.4
107,882	+				-2.8
107,882	+				-0.5
107,882	+				-0.6
107,882	+				-1.2
107,883	-				-0.0
107,883	-				+0.4
107,883	-				-0.1
107,883	-				-0.3
107,883	-				+0.1
107,883	-				+0.2
107,883	-				-1.4
107,883	-				-0.2
107,883	-				+1.1
107,883	-				-0.6
108,296	+		MPMX19_05959	0.48	-0.4
108,296	+		MPMX19_05959	0.48	-0.4
108,296	+		MPMX19_05959	0.48	+0.8
108,296	+		MPMX19_05959	0.48	-0.3
108,296	+		MPMX19_05959	0.48	-1.0
108,296	+		MPMX19_05959	0.48	-1.0
108,296	+		MPMX19_05959	0.48	+0.1
108,297	-		MPMX19_05959	0.49	+0.9
108,297	-		MPMX19_05959	0.49	-0.4
108,297	-		MPMX19_05959	0.49	-0.6
108,297	-		MPMX19_05959	0.49	-1.4
108,297	-		MPMX19_05959	0.49	-1.8
108,297	-		MPMX19_05959	0.49	+0.2
108,297	-		MPMX19_05959	0.49	+0.9
108,297	-		MPMX19_05959	0.49	+0.1
108,527	+		MPMX19_05959	0.75	-1.1
108,527	+		MPMX19_05959	0.75	-0.4
108,527	+		MPMX19_05959	0.75	-1.4
108,528	-		MPMX19_05959	0.75	+1.9
108,528	-		MPMX19_05959	0.75	+1.1
108,528	-		MPMX19_05959	0.75	+0.9
108,528	-		MPMX19_05959	0.75	+0.4
108,528	-		MPMX19_05959	0.75	-0.4
108,558	+		MPMX19_05959	0.79	-2.8
108,558	+		MPMX19_05959	0.79	+0.8
108,558	+		MPMX19_05959	0.79	-0.2
108,558	+		MPMX19_05959	0.79	+0.8
108,559	-		MPMX19_05959	0.79	+1.0
108,559	-		MPMX19_05959	0.79	-0.9
108,559	-		MPMX19_05959	0.79	-0.2
108,559	-		MPMX19_05959	0.79	+0.2
108,559	-		MPMX19_05959	0.79	-0.9
108,559	-		MPMX19_05959	0.79	+1.1
108,559	-		MPMX19_05959	0.79	+0.4
108,559	-		MPMX19_05959	0.79	-0.4
108,559	-		MPMX19_05959	0.79	+0.3
108,559	-		MPMX19_05959	0.79	+0.3
108,564	+		MPMX19_05959	0.79	+0.1
108,564	+		MPMX19_05959	0.79	+0.2
108,564	+		MPMX19_05959	0.79	+1.6
108,564	+		MPMX19_05959	0.79	+0.2
108,564	+		MPMX19_05959	0.79	-0.1
108,564	+		MPMX19_05959	0.79	-0.3
108,564	+		MPMX19_05959	0.79	+1.3
108,565	-		MPMX19_05959	0.79	-1.2
108,565	-		MPMX19_05959	0.79	-0.6
108,565	-		MPMX19_05959	0.79	-1.1
108,651	-		MPMX19_05959	0.89	-0.6
108,651	-		MPMX19_05959	0.89	+0.6
108,698	+				-1.0
108,698	+				+0.1
108,698	+				-0.9
108,698	+				-0.1
108,698	+				+0.2
108,698	+				-0.4
108,698	+				+0.5
108,698	+				+0.9
108,699	-				-0.1
108,699	-				+0.4
108,830	+				-1.3
108,831	-				+0.0
108,846	+				-1.1
108,846	+				-0.3
108,846	+				-1.1
108,846	+				-0.6
108,846	+				+0.8
108,846	+				-2.7
108,847	-				-1.6
108,847	-				+0.3
108,847	-				+0.4
108,847	-				-0.2
108,847	-				-1.4
108,847	-				+0.5
108,847	-				-0.7
108,847	-				+0.1
108,847	-				+0.2
109,161	+				+0.4
109,161	+				+0.1
109,161	+				+0.7
109,161	+				+1.2
109,161	+				-0.1
109,161	+				-1.9
109,161	+				+0.9
109,161	+				-0.6
109,161	+				+0.8
109,161	+				-1.0
109,162	-				+0.2
109,162	-				+0.8
109,162	-				-1.4
109,162	-				+0.7
109,162	-				+0.4
109,162	-				+0.9
109,162	-				+0.2
109,162	-				+0.2
109,162	-				+1.4
109,162	-				-1.1
109,162	-				-0.3
109,162	-				-0.7
109,162	-				-1.6
109,162	-				+0.4
109,162	-				-1.6
109,162	-				-1.1
109,215	+				-1.3
109,215	+				-0.9
109,215	+				+0.6
109,216	-				+0.7
109,216	-				-0.2
109,216	-				-1.4
109,216	-				-0.9
109,216	-				-1.9
109,216	-				-0.7
109,216	-				-0.9
109,466	+		MPMX19_05961	0.38	-1.0
109,466	+		MPMX19_05961	0.38	-0.9
109,466	+		MPMX19_05961	0.38	-0.5
109,466	+		MPMX19_05961	0.38	+1.2
109,466	+		MPMX19_05961	0.38	-0.1
109,466	+		MPMX19_05961	0.38	-1.0
109,466	+		MPMX19_05961	0.38	+0.4
109,466	+		MPMX19_05961	0.38	+0.3
109,466	+		MPMX19_05961	0.38	-0.9
109,466	+		MPMX19_05961	0.38	+0.4
109,466	+		MPMX19_05961	0.38	+0.1
109,466	+		MPMX19_05961	0.38	-3.1
109,466	+		MPMX19_05961	0.38	-2.5
109,466	+		MPMX19_05961	0.38	-0.7
109,466	+		MPMX19_05961	0.38	+0.5
109,466	+		MPMX19_05961	0.38	-0.5
109,466	+		MPMX19_05961	0.38	-0.4
109,466	+		MPMX19_05961	0.38	-1.7
109,466	+		MPMX19_05961	0.38	-1.0
109,467	-		MPMX19_05961	0.38	-1.5
109,467	-		MPMX19_05961	0.38	-0.9
109,467	-		MPMX19_05961	0.38	+1.2
109,467	-		MPMX19_05961	0.38	-0.3
109,467	-		MPMX19_05961	0.38	+0.2
109,467	-		MPMX19_05961	0.38	+0.7
109,467	-		MPMX19_05961	0.38	-0.9
109,467	-		MPMX19_05961	0.38	-0.8
109,467	-		MPMX19_05961	0.38	-0.4
109,467	-		MPMX19_05961	0.38	+0.4
109,467	-		MPMX19_05961	0.38	-1.3
109,467	-		MPMX19_05961	0.38	-0.3
109,467	-		MPMX19_05961	0.38	-1.4
109,467	-		MPMX19_05961	0.38	-0.3
109,467	-		MPMX19_05961	0.38	+0.3
109,467	-		MPMX19_05961	0.38	-0.2
109,712	+		MPMX19_05961	0.90	-0.2
109,712	+		MPMX19_05961	0.90	-1.4
109,712	+		MPMX19_05961	0.90	+0.7
109,713	-				-0.2
109,713	-				-0.0
109,713	-				-0.1