Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05129 and MPMX19_05130 are separated by 45 nucleotides MPMX19_05130 and MPMX19_05131 are separated by 121 nucleotides MPMX19_05131 and MPMX19_05132 are separated by 873 nucleotides
MPMX19_05129: MPMX19_05129 - hypothetical protein, at 617,308 to 617,472
_05129
MPMX19_05130: MPMX19_05130 - hypothetical protein, at 617,518 to 618,300
_05130
MPMX19_05131: MPMX19_05131 - hypothetical protein, at 618,422 to 618,982
_05131
MPMX19_05132: MPMX19_05132 - hypothetical protein, at 619,856 to 620,764
_05132
Position (kb) 618
619 Strain fitness (log2 ratio) -2
-1
0
1 at 617.612 kb on + strand, within MPMX19_05130 at 617.613 kb on - strand, within MPMX19_05130 at 617.613 kb on - strand, within MPMX19_05130 at 617.613 kb on - strand, within MPMX19_05130 at 617.613 kb on - strand, within MPMX19_05130 at 617.720 kb on + strand, within MPMX19_05130 at 617.720 kb on + strand, within MPMX19_05130 at 617.720 kb on + strand, within MPMX19_05130 at 617.720 kb on + strand, within MPMX19_05130 at 617.720 kb on + strand, within MPMX19_05130 at 617.720 kb on + strand, within MPMX19_05130 at 617.720 kb on + strand, within MPMX19_05130 at 617.721 kb on - strand, within MPMX19_05130 at 617.721 kb on - strand, within MPMX19_05130 at 617.721 kb on - strand, within MPMX19_05130 at 617.721 kb on - strand, within MPMX19_05130 at 617.721 kb on - strand, within MPMX19_05130 at 617.721 kb on - strand, within MPMX19_05130 at 617.721 kb on - strand, within MPMX19_05130 at 617.842 kb on + strand, within MPMX19_05130 at 617.843 kb on - strand, within MPMX19_05130 at 617.843 kb on - strand, within MPMX19_05130 at 617.843 kb on - strand, within MPMX19_05130 at 617.843 kb on - strand, within MPMX19_05130 at 618.122 kb on + strand, within MPMX19_05130 at 618.123 kb on - strand, within MPMX19_05130 at 618.123 kb on - strand, within MPMX19_05130 at 618.123 kb on - strand, within MPMX19_05130 at 618.123 kb on - strand, within MPMX19_05130 at 618.123 kb on - strand, within MPMX19_05130 at 618.243 kb on + strand at 618.243 kb on + strand at 618.243 kb on + strand at 618.243 kb on + strand at 618.243 kb on + strand at 618.243 kb on + strand at 618.244 kb on - strand at 618.244 kb on - strand at 618.244 kb on - strand at 618.244 kb on - strand at 618.300 kb on + strand at 618.300 kb on + strand at 618.300 kb on + strand at 618.301 kb on - strand at 618.301 kb on - strand at 618.301 kb on - strand at 618.644 kb on + strand, within MPMX19_05131 at 618.644 kb on + strand, within MPMX19_05131 at 618.645 kb on - strand, within MPMX19_05131 at 618.645 kb on - strand, within MPMX19_05131 at 618.645 kb on - strand, within MPMX19_05131 at 618.672 kb on + strand, within MPMX19_05131 at 618.672 kb on + strand, within MPMX19_05131 at 618.672 kb on + strand, within MPMX19_05131 at 618.672 kb on + strand, within MPMX19_05131 at 618.672 kb on + strand, within MPMX19_05131 at 618.672 kb on + strand, within MPMX19_05131 at 618.672 kb on + strand, within MPMX19_05131 at 618.672 kb on + strand, within MPMX19_05131 at 618.673 kb on - strand, within MPMX19_05131 at 618.673 kb on - strand, within MPMX19_05131 at 618.673 kb on - strand, within MPMX19_05131 at 618.673 kb on - strand, within MPMX19_05131 at 618.673 kb on - strand, within MPMX19_05131 at 618.673 kb on - strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.804 kb on + strand, within MPMX19_05131 at 618.805 kb on - strand, within MPMX19_05131 at 618.805 kb on - strand, within MPMX19_05131 at 618.805 kb on - strand, within MPMX19_05131 at 618.805 kb on - strand, within MPMX19_05131 at 618.805 kb on - strand, within MPMX19_05131 at 618.805 kb on - strand, within MPMX19_05131 at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.978 kb on + strand at 618.979 kb on - strand at 618.979 kb on - strand at 618.979 kb on - strand at 618.979 kb on - strand at 618.979 kb on - strand at 618.979 kb on - strand at 618.979 kb on - strand at 618.979 kb on - strand at 618.979 kb on - strand at 618.979 kb on - strand at 618.979 kb on - strand at 618.979 kb on - strand at 618.979 kb on - strand at 619.153 kb on + strand at 619.190 kb on + strand at 619.191 kb on - strand at 619.264 kb on + strand at 619.264 kb on + strand at 619.265 kb on - strand at 619.265 kb on - strand at 619.265 kb on - strand at 619.350 kb on + strand at 619.350 kb on + strand at 619.351 kb on - strand at 619.461 kb on + strand at 619.461 kb on + strand at 619.461 kb on + strand at 619.461 kb on + strand at 619.461 kb on + strand at 619.462 kb on - strand at 619.462 kb on - strand at 619.462 kb on - strand at 619.462 kb on - strand at 619.462 kb on - strand at 619.462 kb on - strand at 619.550 kb on + strand at 619.550 kb on + strand at 619.550 kb on + strand at 619.550 kb on + strand at 619.551 kb on - strand at 619.551 kb on - strand at 619.551 kb on - strand at 619.551 kb on - strand at 619.685 kb on + strand at 619.851 kb on + strand at 619.858 kb on - strand at 619.943 kb on + strand at 619.943 kb on + strand at 619.943 kb on + strand at 619.943 kb on + strand at 619.944 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 617,612 + MPMX19_05130 0.12 -0.1 617,613 - MPMX19_05130 0.12 -0.5 617,613 - MPMX19_05130 0.12 -0.0 617,613 - MPMX19_05130 0.12 -2.0 617,613 - MPMX19_05130 0.12 -0.6 617,720 + MPMX19_05130 0.26 +0.3 617,720 + MPMX19_05130 0.26 -1.2 617,720 + MPMX19_05130 0.26 +0.6 617,720 + MPMX19_05130 0.26 -1.4 617,720 + MPMX19_05130 0.26 -1.7 617,720 + MPMX19_05130 0.26 +0.3 617,720 + MPMX19_05130 0.26 +0.1 617,721 - MPMX19_05130 0.26 +0.7 617,721 - MPMX19_05130 0.26 -1.3 617,721 - MPMX19_05130 0.26 -0.5 617,721 - MPMX19_05130 0.26 -0.6 617,721 - MPMX19_05130 0.26 +0.0 617,721 - MPMX19_05130 0.26 +0.2 617,721 - MPMX19_05130 0.26 -0.4 617,842 + MPMX19_05130 0.41 -0.7 617,843 - MPMX19_05130 0.42 +1.5 617,843 - MPMX19_05130 0.42 -0.1 617,843 - MPMX19_05130 0.42 -1.2 617,843 - MPMX19_05130 0.42 -0.9 618,122 + MPMX19_05130 0.77 +0.9 618,123 - MPMX19_05130 0.77 +0.3 618,123 - MPMX19_05130 0.77 -1.3 618,123 - MPMX19_05130 0.77 +0.3 618,123 - MPMX19_05130 0.77 -0.3 618,123 - MPMX19_05130 0.77 -0.9 618,243 + -1.0 618,243 + -0.6 618,243 + -0.9 618,243 + -1.9 618,243 + -0.0 618,243 + +1.0 618,244 - -0.0 618,244 - -1.4 618,244 - -1.3 618,244 - -0.8 618,300 + -0.5 618,300 + -1.5 618,300 + -0.9 618,301 - -0.8 618,301 - -0.5 618,301 - +0.8 618,644 + MPMX19_05131 0.40 -0.0 618,644 + MPMX19_05131 0.40 +1.3 618,645 - MPMX19_05131 0.40 -0.1 618,645 - MPMX19_05131 0.40 -0.4 618,645 - MPMX19_05131 0.40 +0.8 618,672 + MPMX19_05131 0.45 +0.9 618,672 + MPMX19_05131 0.45 -1.5 618,672 + MPMX19_05131 0.45 -0.4 618,672 + MPMX19_05131 0.45 +0.3 618,672 + MPMX19_05131 0.45 +0.9 618,672 + MPMX19_05131 0.45 -1.2 618,672 + MPMX19_05131 0.45 +0.9 618,672 + MPMX19_05131 0.45 +0.5 618,673 - MPMX19_05131 0.45 +0.0 618,673 - MPMX19_05131 0.45 -0.6 618,673 - MPMX19_05131 0.45 -0.9 618,673 - MPMX19_05131 0.45 -2.5 618,673 - MPMX19_05131 0.45 -0.1 618,673 - MPMX19_05131 0.45 +0.3 618,804 + MPMX19_05131 0.68 -0.2 618,804 + MPMX19_05131 0.68 -0.4 618,804 + MPMX19_05131 0.68 -0.9 618,804 + MPMX19_05131 0.68 -0.8 618,804 + MPMX19_05131 0.68 +0.5 618,804 + MPMX19_05131 0.68 -0.0 618,804 + MPMX19_05131 0.68 +0.1 618,804 + MPMX19_05131 0.68 -0.2 618,804 + MPMX19_05131 0.68 +0.1 618,804 + MPMX19_05131 0.68 -0.4 618,804 + MPMX19_05131 0.68 +0.9 618,804 + MPMX19_05131 0.68 +0.3 618,805 - MPMX19_05131 0.68 +0.3 618,805 - MPMX19_05131 0.68 +0.8 618,805 - MPMX19_05131 0.68 -1.5 618,805 - MPMX19_05131 0.68 -0.6 618,805 - MPMX19_05131 0.68 +0.4 618,805 - MPMX19_05131 0.68 +0.8 618,978 + -0.1 618,978 + +1.3 618,978 + -1.1 618,978 + +1.0 618,978 + -0.4 618,978 + +0.7 618,978 + -0.7 618,978 + -0.1 618,978 + -0.1 618,978 + +0.1 618,978 + -0.3 618,978 + -1.3 618,978 + +0.0 618,978 + -0.0 618,978 + +0.6 618,978 + -0.5 618,978 + -1.3 618,978 + +0.7 618,978 + -1.1 618,979 - -0.3 618,979 - -0.1 618,979 - +0.8 618,979 - -0.2 618,979 - -1.6 618,979 - -1.2 618,979 - +0.6 618,979 - +0.2 618,979 - -0.2 618,979 - +0.4 618,979 - -1.0 618,979 - -0.3 618,979 - -0.7 619,153 + +0.6 619,190 + +0.8 619,191 - -1.1 619,264 + -1.1 619,264 + +0.0 619,265 - +1.0 619,265 - -0.8 619,265 - -0.5 619,350 + +0.1 619,350 + +0.4 619,351 - -0.9 619,461 + -0.4 619,461 + -0.5 619,461 + -0.4 619,461 + +0.6 619,461 + -2.0 619,462 - -0.9 619,462 - -2.2 619,462 - +0.5 619,462 - -0.6 619,462 - -1.9 619,462 - -0.2 619,550 + -1.7 619,550 + -0.6 619,550 + +0.7 619,550 + -1.3 619,551 - +0.3 619,551 - -0.2 619,551 - -0.5 619,551 - +0.3 619,685 + -0.5 619,851 + -0.9 619,858 - -0.3 619,943 + -2.5 619,943 + -0.8 619,943 + -0.1 619,943 + -0.7 619,944 - -0.2
Or see this region's nucleotide sequence