Experiment: NL-CCM; spin-x control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00294 and MPMX19_00295 overlap by 4 nucleotides MPMX19_00295 and MPMX19_00296 are separated by 236 nucleotides MPMX19_00296 and MPMX19_00297 are separated by 40 nucleotides
MPMX19_00294: MPMX19_00294 - Adaptive-response sensory-kinase SasA, at 293,488 to 294,945
_00294
MPMX19_00295: MPMX19_00295 - Transcriptional regulatory protein QseB, at 294,942 to 295,655
_00295
MPMX19_00296: MPMX19_00296 - (S)-sulfolactate dehydrogenase, at 295,892 to 296,845
_00296
MPMX19_00297: MPMX19_00297 - 4-carboxy-4-hydroxy-2-oxoadipate aldolase, at 296,886 to 297,554
_00297
Position (kb) 295
296
297 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 295.003 kb on + strand at 295.003 kb on + strand at 295.003 kb on + strand at 295.003 kb on + strand at 295.003 kb on + strand at 295.003 kb on + strand at 295.003 kb on + strand at 295.003 kb on + strand at 295.003 kb on + strand at 295.003 kb on + strand at 295.003 kb on + strand at 295.004 kb on - strand at 295.004 kb on - strand at 295.004 kb on - strand at 295.004 kb on - strand at 295.004 kb on - strand at 295.004 kb on - strand at 295.120 kb on + strand, within MPMX19_00295 at 295.120 kb on + strand, within MPMX19_00295 at 295.121 kb on - strand, within MPMX19_00295 at 295.121 kb on - strand, within MPMX19_00295 at 295.363 kb on + strand, within MPMX19_00295 at 295.363 kb on + strand, within MPMX19_00295 at 295.363 kb on + strand, within MPMX19_00295 at 295.363 kb on + strand, within MPMX19_00295 at 295.363 kb on + strand, within MPMX19_00295 at 295.363 kb on + strand, within MPMX19_00295 at 295.363 kb on + strand, within MPMX19_00295 at 295.363 kb on + strand, within MPMX19_00295 at 295.363 kb on + strand, within MPMX19_00295 at 295.363 kb on + strand, within MPMX19_00295 at 295.363 kb on + strand, within MPMX19_00295 at 295.364 kb on - strand, within MPMX19_00295 at 295.364 kb on - strand, within MPMX19_00295 at 295.364 kb on - strand, within MPMX19_00295 at 295.364 kb on - strand, within MPMX19_00295 at 295.364 kb on - strand, within MPMX19_00295 at 295.364 kb on - strand, within MPMX19_00295 at 295.831 kb on + strand at 295.832 kb on - strand at 295.832 kb on - strand at 295.832 kb on - strand at 296.064 kb on + strand, within MPMX19_00296 at 296.064 kb on + strand, within MPMX19_00296 at 296.064 kb on + strand, within MPMX19_00296 at 296.064 kb on + strand, within MPMX19_00296 at 296.064 kb on + strand, within MPMX19_00296 at 296.064 kb on + strand, within MPMX19_00296 at 296.064 kb on + strand, within MPMX19_00296 at 296.064 kb on + strand, within MPMX19_00296 at 296.064 kb on + strand, within MPMX19_00296 at 296.064 kb on + strand, within MPMX19_00296 at 296.064 kb on + strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.065 kb on - strand, within MPMX19_00296 at 296.223 kb on + strand, within MPMX19_00296 at 296.223 kb on + strand, within MPMX19_00296 at 296.223 kb on + strand, within MPMX19_00296 at 296.223 kb on + strand, within MPMX19_00296 at 296.223 kb on + strand, within MPMX19_00296 at 296.224 kb on - strand, within MPMX19_00296 at 296.224 kb on - strand, within MPMX19_00296 at 296.224 kb on - strand, within MPMX19_00296 at 296.224 kb on - strand, within MPMX19_00296 at 296.224 kb on - strand, within MPMX19_00296 at 296.263 kb on + strand, within MPMX19_00296 at 296.263 kb on + strand, within MPMX19_00296 at 296.263 kb on + strand, within MPMX19_00296 at 296.263 kb on + strand, within MPMX19_00296 at 296.263 kb on + strand, within MPMX19_00296 at 296.263 kb on + strand, within MPMX19_00296 at 296.263 kb on + strand, within MPMX19_00296 at 296.264 kb on - strand, within MPMX19_00296 at 296.264 kb on - strand, within MPMX19_00296 at 296.264 kb on - strand, within MPMX19_00296 at 296.264 kb on - strand, within MPMX19_00296 at 296.264 kb on - strand, within MPMX19_00296 at 296.264 kb on - strand, within MPMX19_00296 at 296.264 kb on - strand, within MPMX19_00296 at 296.264 kb on - strand, within MPMX19_00296 at 296.264 kb on - strand, within MPMX19_00296 at 296.264 kb on - strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.490 kb on + strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.491 kb on - strand, within MPMX19_00296 at 296.733 kb on + strand, within MPMX19_00296 at 296.733 kb on + strand, within MPMX19_00296 at 296.733 kb on + strand, within MPMX19_00296 at 296.733 kb on + strand, within MPMX19_00296 at 296.733 kb on + strand, within MPMX19_00296 at 296.733 kb on + strand, within MPMX19_00296 at 296.733 kb on + strand, within MPMX19_00296 at 296.733 kb on + strand, within MPMX19_00296 at 296.733 kb on + strand, within MPMX19_00296 at 296.733 kb on + strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.734 kb on - strand, within MPMX19_00296 at 296.754 kb on + strand at 296.754 kb on + strand at 296.754 kb on + strand at 296.754 kb on + strand at 296.754 kb on + strand at 296.754 kb on + strand at 296.754 kb on + strand at 296.754 kb on + strand at 296.754 kb on + strand at 296.754 kb on + strand at 296.754 kb on + strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.755 kb on - strand at 296.769 kb on + strand at 296.769 kb on + strand at 296.769 kb on + strand at 296.769 kb on + strand at 296.770 kb on - strand at 296.770 kb on - strand at 296.770 kb on - strand at 296.770 kb on - strand at 296.770 kb on - strand at 296.914 kb on + strand at 296.914 kb on + strand at 296.914 kb on + strand at 296.914 kb on + strand at 296.914 kb on + strand at 296.914 kb on + strand at 296.914 kb on + strand at 296.915 kb on - strand at 296.915 kb on - strand at 296.915 kb on - strand at 296.971 kb on + strand, within MPMX19_00297 at 296.972 kb on - strand, within MPMX19_00297 at 297.353 kb on + strand, within MPMX19_00297 at 297.354 kb on - strand, within MPMX19_00297 at 297.626 kb on - strand at 297.760 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM; spin-x control remove 295,003 + +0.1 295,003 + +0.6 295,003 + -0.3 295,003 + +1.0 295,003 + -2.6 295,003 + -2.2 295,003 + +0.0 295,003 + -1.2 295,003 + -0.1 295,003 + +0.7 295,003 + +2.1 295,004 - +3.0 295,004 - +0.5 295,004 - +0.8 295,004 - -0.3 295,004 - +0.1 295,004 - +0.2 295,120 + MPMX19_00295 0.25 +0.4 295,120 + MPMX19_00295 0.25 +0.6 295,121 - MPMX19_00295 0.25 -0.9 295,121 - MPMX19_00295 0.25 +1.2 295,363 + MPMX19_00295 0.59 -1.8 295,363 + MPMX19_00295 0.59 -0.9 295,363 + MPMX19_00295 0.59 +0.1 295,363 + MPMX19_00295 0.59 +0.5 295,363 + MPMX19_00295 0.59 +0.8 295,363 + MPMX19_00295 0.59 -2.1 295,363 + MPMX19_00295 0.59 -0.3 295,363 + MPMX19_00295 0.59 -0.2 295,363 + MPMX19_00295 0.59 +1.1 295,363 + MPMX19_00295 0.59 -0.7 295,363 + MPMX19_00295 0.59 -0.9 295,364 - MPMX19_00295 0.59 -1.9 295,364 - MPMX19_00295 0.59 -1.6 295,364 - MPMX19_00295 0.59 +1.2 295,364 - MPMX19_00295 0.59 +0.5 295,364 - MPMX19_00295 0.59 -0.2 295,364 - MPMX19_00295 0.59 +0.2 295,831 + -2.1 295,832 - -0.0 295,832 - -0.2 295,832 - -0.7 296,064 + MPMX19_00296 0.18 +1.1 296,064 + MPMX19_00296 0.18 +1.1 296,064 + MPMX19_00296 0.18 -0.0 296,064 + MPMX19_00296 0.18 +1.1 296,064 + MPMX19_00296 0.18 -0.5 296,064 + MPMX19_00296 0.18 +0.1 296,064 + MPMX19_00296 0.18 -1.2 296,064 + MPMX19_00296 0.18 -2.6 296,064 + MPMX19_00296 0.18 -1.0 296,064 + MPMX19_00296 0.18 -2.1 296,064 + MPMX19_00296 0.18 -0.8 296,065 - MPMX19_00296 0.18 -1.6 296,065 - MPMX19_00296 0.18 -1.0 296,065 - MPMX19_00296 0.18 +0.3 296,065 - MPMX19_00296 0.18 -2.2 296,065 - MPMX19_00296 0.18 -0.1 296,065 - MPMX19_00296 0.18 +0.2 296,065 - MPMX19_00296 0.18 +0.5 296,065 - MPMX19_00296 0.18 -0.3 296,065 - MPMX19_00296 0.18 -1.6 296,065 - MPMX19_00296 0.18 +0.6 296,065 - MPMX19_00296 0.18 +0.8 296,065 - MPMX19_00296 0.18 +0.2 296,223 + MPMX19_00296 0.35 +0.1 296,223 + MPMX19_00296 0.35 +0.1 296,223 + MPMX19_00296 0.35 -0.6 296,223 + MPMX19_00296 0.35 +0.4 296,223 + MPMX19_00296 0.35 -0.7 296,224 - MPMX19_00296 0.35 +0.1 296,224 - MPMX19_00296 0.35 -0.8 296,224 - MPMX19_00296 0.35 +0.2 296,224 - MPMX19_00296 0.35 +1.8 296,224 - MPMX19_00296 0.35 -1.4 296,263 + MPMX19_00296 0.39 -0.2 296,263 + MPMX19_00296 0.39 +0.1 296,263 + MPMX19_00296 0.39 -0.5 296,263 + MPMX19_00296 0.39 +0.2 296,263 + MPMX19_00296 0.39 +0.5 296,263 + MPMX19_00296 0.39 -1.2 296,263 + MPMX19_00296 0.39 -0.4 296,264 - MPMX19_00296 0.39 -0.9 296,264 - MPMX19_00296 0.39 -0.9 296,264 - MPMX19_00296 0.39 +0.5 296,264 - MPMX19_00296 0.39 -0.9 296,264 - MPMX19_00296 0.39 +0.4 296,264 - MPMX19_00296 0.39 -0.6 296,264 - MPMX19_00296 0.39 -1.1 296,264 - MPMX19_00296 0.39 +1.6 296,264 - MPMX19_00296 0.39 +1.5 296,264 - MPMX19_00296 0.39 +0.2 296,490 + MPMX19_00296 0.63 +0.1 296,490 + MPMX19_00296 0.63 -1.3 296,490 + MPMX19_00296 0.63 -0.4 296,490 + MPMX19_00296 0.63 +0.2 296,490 + MPMX19_00296 0.63 -0.6 296,490 + MPMX19_00296 0.63 -0.8 296,490 + MPMX19_00296 0.63 +0.6 296,490 + MPMX19_00296 0.63 +0.5 296,490 + MPMX19_00296 0.63 -0.1 296,490 + MPMX19_00296 0.63 -1.2 296,490 + MPMX19_00296 0.63 -2.3 296,490 + MPMX19_00296 0.63 +0.3 296,490 + MPMX19_00296 0.63 +1.2 296,490 + MPMX19_00296 0.63 +0.1 296,490 + MPMX19_00296 0.63 +0.9 296,491 - MPMX19_00296 0.63 -0.1 296,491 - MPMX19_00296 0.63 -0.0 296,491 - MPMX19_00296 0.63 -0.4 296,491 - MPMX19_00296 0.63 -1.2 296,491 - MPMX19_00296 0.63 -1.4 296,491 - MPMX19_00296 0.63 -0.2 296,491 - MPMX19_00296 0.63 -0.1 296,491 - MPMX19_00296 0.63 +0.2 296,491 - MPMX19_00296 0.63 -1.7 296,491 - MPMX19_00296 0.63 -1.1 296,491 - MPMX19_00296 0.63 -0.5 296,491 - MPMX19_00296 0.63 +0.8 296,491 - MPMX19_00296 0.63 -1.9 296,491 - MPMX19_00296 0.63 -2.3 296,733 + MPMX19_00296 0.88 -2.3 296,733 + MPMX19_00296 0.88 -0.4 296,733 + MPMX19_00296 0.88 -1.2 296,733 + MPMX19_00296 0.88 -1.6 296,733 + MPMX19_00296 0.88 -0.6 296,733 + MPMX19_00296 0.88 -0.0 296,733 + MPMX19_00296 0.88 -0.7 296,733 + MPMX19_00296 0.88 -0.4 296,733 + MPMX19_00296 0.88 -2.2 296,733 + MPMX19_00296 0.88 -1.7 296,734 - MPMX19_00296 0.88 -2.4 296,734 - MPMX19_00296 0.88 -1.9 296,734 - MPMX19_00296 0.88 -1.3 296,734 - MPMX19_00296 0.88 -1.4 296,734 - MPMX19_00296 0.88 -0.3 296,734 - MPMX19_00296 0.88 -1.5 296,734 - MPMX19_00296 0.88 -0.4 296,734 - MPMX19_00296 0.88 -0.5 296,734 - MPMX19_00296 0.88 +0.4 296,734 - MPMX19_00296 0.88 +0.9 296,734 - MPMX19_00296 0.88 -0.9 296,734 - MPMX19_00296 0.88 -0.3 296,734 - MPMX19_00296 0.88 -1.5 296,734 - MPMX19_00296 0.88 -0.4 296,734 - MPMX19_00296 0.88 -1.8 296,734 - MPMX19_00296 0.88 -2.4 296,734 - MPMX19_00296 0.88 +0.0 296,754 + -0.7 296,754 + -0.6 296,754 + +0.6 296,754 + -1.4 296,754 + +0.2 296,754 + +1.3 296,754 + -1.2 296,754 + +0.1 296,754 + -1.5 296,754 + +0.2 296,754 + +0.3 296,755 - -0.4 296,755 - -0.2 296,755 - +1.4 296,755 - -0.9 296,755 - -0.8 296,755 - -1.0 296,755 - -0.6 296,755 - -0.4 296,755 - +0.7 296,755 - -1.8 296,755 - +1.2 296,755 - +0.5 296,755 - -2.0 296,755 - -0.1 296,755 - -0.3 296,769 + +1.4 296,769 + -2.4 296,769 + -0.0 296,769 + +0.6 296,770 - -1.6 296,770 - -0.8 296,770 - -1.8 296,770 - -0.3 296,770 - -1.5 296,914 + -1.3 296,914 + -0.0 296,914 + -0.1 296,914 + +0.5 296,914 + +0.1 296,914 + +0.4 296,914 + -0.1 296,915 - -2.1 296,915 - -2.3 296,915 - +0.9 296,971 + MPMX19_00297 0.13 +0.4 296,972 - MPMX19_00297 0.13 -0.8 297,353 + MPMX19_00297 0.70 +0.3 297,354 - MPMX19_00297 0.70 -1.3 297,626 - +0.0 297,760 - +0.5
Or see this region's nucleotide sequence