Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF813 and GFF814 are separated by 17 nucleotides GFF814 and GFF815 are separated by 24 nucleotides
GFF813 - hypothetical protein, at 869,688 to 871,070
GFF813
GFF814 - Putative aliphatic sulfonates-binding protein, at 871,088 to 872,107
GFF814
GFF815 - Putative aliphatic sulfonates-binding protein, at 872,132 to 873,148
GFF815
Position (kb) 871
872
873 Strain fitness (log2 ratio) -2
-1
0
1 at 870.139 kb on + strand, within GFF813 at 870.139 kb on + strand, within GFF813 at 870.140 kb on - strand, within GFF813 at 870.140 kb on - strand, within GFF813 at 870.140 kb on - strand, within GFF813 at 871.246 kb on - strand, within GFF814 at 871.249 kb on - strand, within GFF814 at 871.287 kb on + strand, within GFF814 at 871.287 kb on + strand, within GFF814 at 871.287 kb on + strand, within GFF814 at 871.320 kb on + strand, within GFF814 at 871.320 kb on + strand, within GFF814 at 871.320 kb on + strand, within GFF814 at 871.321 kb on - strand, within GFF814 at 871.332 kb on + strand, within GFF814 at 871.332 kb on + strand, within GFF814 at 871.333 kb on - strand, within GFF814 at 871.365 kb on - strand, within GFF814 at 871.509 kb on + strand, within GFF814 at 871.510 kb on - strand, within GFF814 at 871.510 kb on - strand, within GFF814 at 871.620 kb on + strand, within GFF814 at 871.629 kb on + strand, within GFF814 at 871.629 kb on + strand, within GFF814 at 871.720 kb on + strand, within GFF814 at 871.861 kb on - strand, within GFF814 at 871.914 kb on + strand, within GFF814 at 871.915 kb on - strand, within GFF814 at 871.974 kb on + strand, within GFF814 at 871.975 kb on - strand, within GFF814 at 872.340 kb on + strand, within GFF815 at 872.340 kb on + strand, within GFF815 at 872.341 kb on - strand, within GFF815 at 872.341 kb on - strand, within GFF815 at 872.373 kb on + strand, within GFF815 at 872.373 kb on + strand, within GFF815 at 872.374 kb on - strand, within GFF815 at 872.632 kb on - strand, within GFF815 at 872.673 kb on + strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.674 kb on - strand, within GFF815 at 872.683 kb on - strand, within GFF815 at 872.782 kb on - strand, within GFF815 at 872.782 kb on - strand, within GFF815 at 872.782 kb on - strand, within GFF815 at 872.916 kb on + strand, within GFF815 at 872.917 kb on - strand, within GFF815 at 872.917 kb on - strand, within GFF815 at 872.917 kb on - strand, within GFF815 at 872.970 kb on + strand, within GFF815 at 872.970 kb on + strand, within GFF815 at 873.031 kb on - strand, within GFF815
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 870,139 + GFF813 0.33 +0.9 870,139 + GFF813 0.33 -1.0 870,140 - GFF813 0.33 -1.2 870,140 - GFF813 0.33 -0.7 870,140 - GFF813 0.33 +1.4 871,246 - GFF814 0.15 -1.8 871,249 - GFF814 0.16 -0.2 871,287 + GFF814 0.20 -0.0 871,287 + GFF814 0.20 -0.4 871,287 + GFF814 0.20 +0.1 871,320 + GFF814 0.23 -0.3 871,320 + GFF814 0.23 +1.2 871,320 + GFF814 0.23 +0.5 871,321 - GFF814 0.23 +1.1 871,332 + GFF814 0.24 -0.6 871,332 + GFF814 0.24 -0.1 871,333 - GFF814 0.24 +0.6 871,365 - GFF814 0.27 -0.5 871,509 + GFF814 0.41 +0.6 871,510 - GFF814 0.41 -0.3 871,510 - GFF814 0.41 -0.5 871,620 + GFF814 0.52 +0.9 871,629 + GFF814 0.53 +1.6 871,629 + GFF814 0.53 -0.7 871,720 + GFF814 0.62 -0.9 871,861 - GFF814 0.76 -0.1 871,914 + GFF814 0.81 -0.7 871,915 - GFF814 0.81 +0.8 871,974 + GFF814 0.87 +0.3 871,975 - GFF814 0.87 +0.2 872,340 + GFF815 0.20 -0.3 872,340 + GFF815 0.20 +0.8 872,341 - GFF815 0.21 -0.5 872,341 - GFF815 0.21 -0.4 872,373 + GFF815 0.24 -0.6 872,373 + GFF815 0.24 -0.7 872,374 - GFF815 0.24 +0.5 872,632 - GFF815 0.49 -0.1 872,673 + GFF815 0.53 -0.2 872,674 - GFF815 0.53 +0.0 872,674 - GFF815 0.53 -1.1 872,674 - GFF815 0.53 -0.8 872,674 - GFF815 0.53 +0.2 872,674 - GFF815 0.53 +0.6 872,674 - GFF815 0.53 -0.2 872,683 - GFF815 0.54 +0.4 872,782 - GFF815 0.64 +1.4 872,782 - GFF815 0.64 -0.9 872,782 - GFF815 0.64 -0.4 872,916 + GFF815 0.77 +0.4 872,917 - GFF815 0.77 -1.0 872,917 - GFF815 0.77 -0.6 872,917 - GFF815 0.77 +0.5 872,970 + GFF815 0.82 -0.1 872,970 + GFF815 0.82 -0.0 873,031 - GFF815 0.88 -0.1
Or see this region's nucleotide sequence