Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF775 and GFF776 overlap by 4 nucleotides GFF776 and GFF777 overlap by 11 nucleotides GFF777 and GFF778 are separated by 243 nucleotides
GFF775 - Aliphatic sulfonates import ATP-binding protein SsuB, at 827,458 to 828,273
GFF775
GFF776 - Putative aliphatic sulfonates transport permease protein SsuC, at 828,270 to 829,094
GFF776
GFF777 - Putative aliphatic sulfonates transport permease protein SsuC, at 829,084 to 829,965
GFF777
GFF778 - hypothetical protein, at 830,209 to 831,321
GFF778
Position (kb) 829
830 Strain fitness (log2 ratio) -1
0
1 at 828.189 kb on - strand, within GFF775 at 828.469 kb on + strand, within GFF776 at 828.470 kb on - strand, within GFF776 at 828.538 kb on + strand, within GFF776 at 828.538 kb on + strand, within GFF776 at 828.538 kb on + strand, within GFF776 at 828.539 kb on - strand, within GFF776 at 828.539 kb on - strand, within GFF776 at 828.928 kb on + strand, within GFF776 at 828.928 kb on + strand, within GFF776 at 828.928 kb on + strand, within GFF776 at 828.928 kb on + strand, within GFF776 at 828.928 kb on + strand, within GFF776 at 828.929 kb on - strand, within GFF776 at 828.929 kb on - strand, within GFF776 at 829.238 kb on + strand, within GFF777 at 829.484 kb on + strand, within GFF777 at 829.575 kb on - strand, within GFF777 at 829.618 kb on + strand, within GFF777 at 829.730 kb on + strand, within GFF777 at 829.730 kb on + strand, within GFF777 at 829.730 kb on + strand, within GFF777 at 830.094 kb on + strand at 830.195 kb on + strand at 830.196 kb on - strand at 830.210 kb on + strand at 830.210 kb on + strand at 830.211 kb on - strand at 830.414 kb on + strand, within GFF778 at 830.414 kb on + strand, within GFF778 at 830.414 kb on + strand, within GFF778 at 830.414 kb on + strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.415 kb on - strand, within GFF778 at 830.627 kb on + strand, within GFF778 at 830.627 kb on + strand, within GFF778 at 830.628 kb on - strand, within GFF778 at 830.628 kb on - strand, within GFF778 at 830.673 kb on - strand, within GFF778 at 830.673 kb on - strand, within GFF778 at 830.711 kb on + strand, within GFF778 at 830.712 kb on - strand, within GFF778 at 830.712 kb on - strand, within GFF778
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 828,189 - GFF775 0.90 +0.5 828,469 + GFF776 0.24 +0.6 828,470 - GFF776 0.24 +0.4 828,538 + GFF776 0.32 +0.5 828,538 + GFF776 0.32 +0.4 828,538 + GFF776 0.32 +0.1 828,539 - GFF776 0.33 -0.7 828,539 - GFF776 0.33 -0.5 828,928 + GFF776 0.80 +0.6 828,928 + GFF776 0.80 +0.2 828,928 + GFF776 0.80 +0.2 828,928 + GFF776 0.80 +0.5 828,928 + GFF776 0.80 -0.2 828,929 - GFF776 0.80 -0.2 828,929 - GFF776 0.80 -0.6 829,238 + GFF777 0.17 -0.4 829,484 + GFF777 0.45 +0.3 829,575 - GFF777 0.56 -1.1 829,618 + GFF777 0.61 +0.1 829,730 + GFF777 0.73 +0.3 829,730 + GFF777 0.73 -1.5 829,730 + GFF777 0.73 +1.0 830,094 + -0.8 830,195 + +0.5 830,196 - +0.1 830,210 + -0.0 830,210 + -1.4 830,211 - -1.3 830,414 + GFF778 0.18 +0.4 830,414 + GFF778 0.18 +0.8 830,414 + GFF778 0.18 -0.1 830,414 + GFF778 0.18 -0.3 830,415 - GFF778 0.19 -0.4 830,415 - GFF778 0.19 +0.0 830,415 - GFF778 0.19 -0.0 830,415 - GFF778 0.19 +0.4 830,415 - GFF778 0.19 +0.0 830,415 - GFF778 0.19 -1.0 830,627 + GFF778 0.38 -0.2 830,627 + GFF778 0.38 +0.1 830,628 - GFF778 0.38 -0.0 830,628 - GFF778 0.38 +1.6 830,673 - GFF778 0.42 +1.1 830,673 - GFF778 0.42 +1.0 830,711 + GFF778 0.45 -0.1 830,712 - GFF778 0.45 +0.9 830,712 - GFF778 0.45 -0.4
Or see this region's nucleotide sequence