Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF746 and GFF747 are separated by 195 nucleotides GFF747 and GFF748 are separated by 418 nucleotides GFF748 and GFF749 are separated by 30 nucleotides
GFF746 - Methylenetetrahydrofolate--tRNA-(uracil-5-)-methy ltransferase TrmFO, at 793,954 to 795,399
GFF746
GFF747 - hypothetical protein, at 795,595 to 795,756
GFF747
GFF748 - hypothetical protein, at 796,175 to 796,789
GFF748
GFF749 - UvrABC system protein A, at 796,820 to 799,957
GFF749
Position (kb) 796
797 Strain fitness (log2 ratio) -2
-1
0
1 at 795.759 kb on + strand at 795.760 kb on - strand at 795.760 kb on - strand at 795.760 kb on - strand at 795.813 kb on + strand at 795.813 kb on + strand at 795.814 kb on - strand at 795.814 kb on - strand at 795.814 kb on - strand at 796.046 kb on + strand at 796.047 kb on - strand at 796.047 kb on - strand at 796.053 kb on - strand at 796.053 kb on - strand at 796.115 kb on + strand at 796.116 kb on - strand at 796.191 kb on - strand at 796.631 kb on + strand, within GFF748 at 796.658 kb on - strand, within GFF748 at 796.731 kb on - strand at 797.313 kb on + strand, within GFF749 at 797.313 kb on + strand, within GFF749 at 797.314 kb on - strand, within GFF749 at 797.314 kb on - strand, within GFF749 at 797.314 kb on - strand, within GFF749 at 797.415 kb on + strand, within GFF749 at 797.539 kb on + strand, within GFF749 at 797.595 kb on + strand, within GFF749 at 797.595 kb on + strand, within GFF749 at 797.595 kb on + strand, within GFF749 at 797.596 kb on - strand, within GFF749 at 797.596 kb on - strand, within GFF749 at 797.596 kb on - strand, within GFF749 at 797.762 kb on - strand, within GFF749 at 797.763 kb on + strand, within GFF749 at 797.764 kb on - strand, within GFF749
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 795,759 + +1.0 795,760 - +0.4 795,760 - -1.0 795,760 - +1.2 795,813 + +0.2 795,813 + +0.1 795,814 - -0.7 795,814 - -1.8 795,814 - -0.6 796,046 + +0.3 796,047 - -0.4 796,047 - +0.5 796,053 - -0.4 796,053 - -0.2 796,115 + -0.4 796,116 - -1.1 796,191 - -0.2 796,631 + GFF748 0.74 -0.7 796,658 - GFF748 0.79 -0.8 796,731 - -2.2 797,313 + GFF749 0.16 +0.4 797,313 + GFF749 0.16 +0.2 797,314 - GFF749 0.16 -0.4 797,314 - GFF749 0.16 -0.0 797,314 - GFF749 0.16 +0.7 797,415 + GFF749 0.19 -0.5 797,539 + GFF749 0.23 -0.2 797,595 + GFF749 0.25 +0.7 797,595 + GFF749 0.25 +0.4 797,595 + GFF749 0.25 +1.4 797,596 - GFF749 0.25 +0.4 797,596 - GFF749 0.25 -0.4 797,596 - GFF749 0.25 +0.1 797,762 - GFF749 0.30 -0.3 797,763 + GFF749 0.30 -0.9 797,764 - GFF749 0.30 -1.3
Or see this region's nucleotide sequence