Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF730 and GFF731 are separated by 239 nucleotides GFF731 and GFF732 are separated by 125 nucleotides GFF732 and GFF733 are separated by 1 nucleotides
GFF730 - Leu/Ile/Val-binding protein, at 776,016 to 777,116
GFF730
GFF731 - Leu/Ile/Val-binding protein, at 777,356 to 778,456
GFF731
GFF732 - hypothetical protein, at 778,582 to 779,040
GFF732
GFF733 - High-affinity branched-chain amino acid transport ATP-binding protein LivF, at 779,042 to 779,815
GFF733
Position (kb) 777
778
779 Strain fitness (log2 ratio) -2
-1
0
1 at 776.458 kb on + strand, within GFF730 at 776.536 kb on + strand, within GFF730 at 776.536 kb on + strand, within GFF730 at 776.536 kb on + strand, within GFF730 at 776.536 kb on + strand, within GFF730 at 776.537 kb on - strand, within GFF730 at 776.537 kb on - strand, within GFF730 at 776.537 kb on - strand, within GFF730 at 776.733 kb on - strand, within GFF730 at 777.334 kb on - strand at 777.370 kb on - strand at 777.370 kb on - strand at 777.390 kb on + strand at 777.390 kb on + strand at 777.390 kb on + strand at 777.391 kb on - strand at 777.391 kb on - strand at 777.391 kb on - strand at 777.391 kb on - strand at 777.391 kb on - strand at 777.552 kb on + strand, within GFF731 at 777.552 kb on + strand, within GFF731 at 777.558 kb on + strand, within GFF731 at 777.558 kb on + strand, within GFF731 at 777.784 kb on - strand, within GFF731 at 777.846 kb on + strand, within GFF731 at 777.846 kb on + strand, within GFF731 at 777.877 kb on - strand, within GFF731 at 777.881 kb on - strand, within GFF731 at 777.942 kb on + strand, within GFF731 at 778.000 kb on - strand, within GFF731 at 778.000 kb on - strand, within GFF731 at 778.125 kb on + strand, within GFF731 at 778.126 kb on - strand, within GFF731 at 778.162 kb on - strand, within GFF731 at 778.162 kb on - strand, within GFF731 at 778.634 kb on + strand, within GFF732 at 778.634 kb on + strand, within GFF732 at 778.634 kb on + strand, within GFF732 at 778.634 kb on + strand, within GFF732 at 778.646 kb on + strand, within GFF732 at 778.646 kb on + strand, within GFF732 at 778.647 kb on - strand, within GFF732 at 778.806 kb on - strand, within GFF732 at 778.806 kb on - strand, within GFF732 at 778.823 kb on + strand, within GFF732 at 779.061 kb on + strand at 779.139 kb on + strand, within GFF733 at 779.139 kb on + strand, within GFF733
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 776,458 + GFF730 0.40 +0.3 776,536 + GFF730 0.47 +1.0 776,536 + GFF730 0.47 -0.3 776,536 + GFF730 0.47 +0.4 776,536 + GFF730 0.47 +0.0 776,537 - GFF730 0.47 -0.5 776,537 - GFF730 0.47 +0.3 776,537 - GFF730 0.47 +0.1 776,733 - GFF730 0.65 -2.1 777,334 - +0.7 777,370 - +0.5 777,370 - -0.5 777,390 + +0.3 777,390 + +1.6 777,390 + +1.6 777,391 - -0.6 777,391 - +0.9 777,391 - +1.2 777,391 - -0.2 777,391 - +0.5 777,552 + GFF731 0.18 +0.7 777,552 + GFF731 0.18 +0.5 777,558 + GFF731 0.18 +1.3 777,558 + GFF731 0.18 +0.4 777,784 - GFF731 0.39 +0.6 777,846 + GFF731 0.45 +0.0 777,846 + GFF731 0.45 +0.7 777,877 - GFF731 0.47 -0.3 777,881 - GFF731 0.48 +1.1 777,942 + GFF731 0.53 +0.7 778,000 - GFF731 0.58 +0.4 778,000 - GFF731 0.58 +1.5 778,125 + GFF731 0.70 +1.2 778,126 - GFF731 0.70 +1.5 778,162 - GFF731 0.73 +1.7 778,162 - GFF731 0.73 +0.1 778,634 + GFF732 0.11 -1.4 778,634 + GFF732 0.11 -0.9 778,634 + GFF732 0.11 +0.1 778,634 + GFF732 0.11 -0.3 778,646 + GFF732 0.14 -1.4 778,646 + GFF732 0.14 -0.0 778,647 - GFF732 0.14 +0.3 778,806 - GFF732 0.49 +1.4 778,806 - GFF732 0.49 +0.1 778,823 + GFF732 0.53 +0.3 779,061 + +0.1 779,139 + GFF733 0.13 +0.6 779,139 + GFF733 0.13 +1.0
Or see this region's nucleotide sequence