Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4893 and GFF4894 are separated by 59 nucleotides
GFF4893 - Caffeyl-CoA reductase-Etf complex subunit CarE, at 35,592 to 36,701
GFF4893
GFF4894 - Caffeyl-CoA reductase-Etf complex subunit CarD, at 36,761 to 37,609
GFF4894
Position (kb) 36
37
38 Strain fitness (log2 ratio) -2
-1
0
1
2 at 35.803 kb on + strand, within GFF4893 at 35.803 kb on + strand, within GFF4893 at 35.803 kb on + strand, within GFF4893 at 35.803 kb on + strand, within GFF4893 at 35.804 kb on - strand, within GFF4893 at 35.893 kb on + strand, within GFF4893 at 35.893 kb on + strand, within GFF4893 at 35.894 kb on - strand, within GFF4893 at 36.002 kb on + strand, within GFF4893 at 36.158 kb on - strand, within GFF4893 at 36.158 kb on - strand, within GFF4893 at 36.158 kb on - strand, within GFF4893 at 36.169 kb on + strand, within GFF4893 at 36.169 kb on + strand, within GFF4893 at 36.169 kb on + strand, within GFF4893 at 36.170 kb on - strand, within GFF4893 at 36.170 kb on - strand, within GFF4893 at 36.346 kb on + strand, within GFF4893 at 36.347 kb on - strand, within GFF4893 at 36.347 kb on - strand, within GFF4893 at 36.347 kb on - strand, within GFF4893 at 36.347 kb on - strand, within GFF4893 at 36.347 kb on - strand, within GFF4893 at 36.347 kb on - strand, within GFF4893 at 36.347 kb on - strand, within GFF4893 at 36.379 kb on + strand, within GFF4893 at 36.395 kb on - strand, within GFF4893 at 36.425 kb on - strand, within GFF4893 at 36.442 kb on + strand, within GFF4893 at 36.443 kb on - strand, within GFF4893 at 36.616 kb on + strand at 36.617 kb on - strand at 36.716 kb on + strand at 36.716 kb on + strand at 36.717 kb on - strand at 37.170 kb on + strand, within GFF4894 at 37.170 kb on + strand, within GFF4894 at 37.170 kb on + strand, within GFF4894 at 37.170 kb on + strand, within GFF4894 at 37.171 kb on - strand, within GFF4894 at 37.171 kb on - strand, within GFF4894 at 37.500 kb on + strand, within GFF4894 at 37.500 kb on + strand, within GFF4894 at 37.501 kb on - strand, within GFF4894 at 37.501 kb on - strand, within GFF4894 at 37.501 kb on - strand, within GFF4894 at 37.652 kb on + strand at 37.652 kb on + strand at 37.652 kb on + strand at 37.653 kb on - strand at 37.653 kb on - strand at 37.653 kb on - strand at 37.665 kb on - strand at 37.754 kb on - strand at 37.754 kb on - strand at 37.754 kb on - strand at 37.827 kb on + strand at 37.827 kb on + strand at 37.827 kb on + strand at 37.827 kb on + strand at 37.828 kb on - strand at 37.828 kb on - strand at 37.828 kb on - strand at 37.828 kb on - strand at 37.881 kb on + strand at 37.881 kb on + strand at 37.881 kb on + strand at 37.881 kb on + strand at 37.882 kb on - strand at 37.882 kb on - strand at 37.882 kb on - strand at 37.882 kb on - strand at 38.026 kb on + strand at 38.031 kb on + strand at 38.043 kb on + strand at 38.043 kb on + strand at 38.043 kb on + strand at 38.043 kb on + strand at 38.044 kb on - strand at 38.053 kb on + strand at 38.062 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 35,803 + GFF4893 0.19 -0.0 35,803 + GFF4893 0.19 +1.7 35,803 + GFF4893 0.19 +0.1 35,803 + GFF4893 0.19 +0.4 35,804 - GFF4893 0.19 +0.7 35,893 + GFF4893 0.27 -0.6 35,893 + GFF4893 0.27 -0.4 35,894 - GFF4893 0.27 +0.3 36,002 + GFF4893 0.37 +0.5 36,158 - GFF4893 0.51 -0.5 36,158 - GFF4893 0.51 +0.1 36,158 - GFF4893 0.51 +0.1 36,169 + GFF4893 0.52 +0.0 36,169 + GFF4893 0.52 +0.1 36,169 + GFF4893 0.52 +1.2 36,170 - GFF4893 0.52 +0.1 36,170 - GFF4893 0.52 -1.9 36,346 + GFF4893 0.68 -0.0 36,347 - GFF4893 0.68 -0.6 36,347 - GFF4893 0.68 +0.3 36,347 - GFF4893 0.68 +0.4 36,347 - GFF4893 0.68 +1.7 36,347 - GFF4893 0.68 -1.8 36,347 - GFF4893 0.68 -0.5 36,347 - GFF4893 0.68 +1.0 36,379 + GFF4893 0.71 -0.5 36,395 - GFF4893 0.72 -0.1 36,425 - GFF4893 0.75 -0.6 36,442 + GFF4893 0.77 +0.9 36,443 - GFF4893 0.77 +0.3 36,616 + -0.4 36,617 - -0.0 36,716 + -1.2 36,716 + -0.9 36,717 - -0.9 37,170 + GFF4894 0.48 -0.5 37,170 + GFF4894 0.48 +1.4 37,170 + GFF4894 0.48 +1.2 37,170 + GFF4894 0.48 -0.0 37,171 - GFF4894 0.48 -1.7 37,171 - GFF4894 0.48 +0.9 37,500 + GFF4894 0.87 -0.2 37,500 + GFF4894 0.87 +0.7 37,501 - GFF4894 0.87 +0.3 37,501 - GFF4894 0.87 -0.6 37,501 - GFF4894 0.87 +0.1 37,652 + -0.1 37,652 + -0.4 37,652 + -0.4 37,653 - -0.1 37,653 - +0.9 37,653 - -0.0 37,665 - +0.1 37,754 - -0.5 37,754 - +1.1 37,754 - +1.1 37,827 + +0.6 37,827 + +0.9 37,827 + +0.6 37,827 + -0.6 37,828 - +0.7 37,828 - +0.5 37,828 - -0.3 37,828 - +1.5 37,881 + +0.7 37,881 + -0.3 37,881 + -0.8 37,881 + -0.4 37,882 - +0.4 37,882 - +0.2 37,882 - +2.2 37,882 - +0.6 38,026 + -0.6 38,031 + -0.1 38,043 + +1.3 38,043 + -0.5 38,043 + +0.0 38,043 + +0.1 38,044 - -0.2 38,053 + +1.3 38,062 + -0.2
Or see this region's nucleotide sequence