Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4890 and GFF4891 are separated by 117 nucleotides GFF4891 and GFF4892 are separated by 80 nucleotides
GFF4890 - hypothetical protein, at 32,964 to 33,767
GFF4890
GFF4891 - Ferredoxin-like protein FixX, at 33,885 to 34,181
GFF4891
GFF4892 - hypothetical protein, at 34,262 to 35,569
GFF4892
Position (kb) 33
34
35 Strain fitness (log2 ratio) -2
-1
0
1
2 at 33.145 kb on - strand, within GFF4890 at 33.244 kb on + strand, within GFF4890 at 33.245 kb on - strand, within GFF4890 at 33.504 kb on + strand, within GFF4890 at 33.514 kb on + strand, within GFF4890 at 33.515 kb on - strand, within GFF4890 at 33.529 kb on + strand, within GFF4890 at 33.529 kb on + strand, within GFF4890 at 33.529 kb on + strand, within GFF4890 at 33.530 kb on - strand, within GFF4890 at 33.793 kb on + strand at 33.794 kb on - strand at 34.130 kb on - strand, within GFF4891 at 34.419 kb on + strand, within GFF4892 at 34.420 kb on - strand, within GFF4892 at 34.473 kb on + strand, within GFF4892 at 34.491 kb on - strand, within GFF4892 at 34.521 kb on + strand, within GFF4892 at 34.639 kb on + strand, within GFF4892 at 34.640 kb on - strand, within GFF4892 at 34.683 kb on + strand, within GFF4892 at 34.683 kb on + strand, within GFF4892 at 34.734 kb on + strand, within GFF4892 at 34.734 kb on + strand, within GFF4892 at 34.734 kb on + strand, within GFF4892 at 34.734 kb on + strand, within GFF4892 at 34.735 kb on - strand, within GFF4892 at 34.735 kb on - strand, within GFF4892 at 34.804 kb on + strand, within GFF4892 at 34.804 kb on + strand, within GFF4892 at 34.804 kb on + strand, within GFF4892 at 34.804 kb on + strand, within GFF4892 at 34.804 kb on + strand, within GFF4892 at 34.804 kb on + strand, within GFF4892 at 34.804 kb on + strand, within GFF4892 at 34.804 kb on + strand, within GFF4892 at 34.804 kb on + strand, within GFF4892 at 34.804 kb on + strand, within GFF4892 at 34.805 kb on - strand, within GFF4892 at 34.805 kb on - strand, within GFF4892 at 34.805 kb on - strand, within GFF4892 at 34.805 kb on - strand, within GFF4892 at 34.805 kb on - strand, within GFF4892 at 34.805 kb on - strand, within GFF4892 at 34.805 kb on - strand, within GFF4892 at 34.805 kb on - strand, within GFF4892 at 34.806 kb on + strand, within GFF4892 at 34.881 kb on + strand, within GFF4892 at 34.882 kb on - strand, within GFF4892 at 35.001 kb on + strand, within GFF4892 at 35.154 kb on + strand, within GFF4892 at 35.154 kb on + strand, within GFF4892 at 35.155 kb on - strand, within GFF4892 at 35.155 kb on - strand, within GFF4892 at 35.155 kb on - strand, within GFF4892 at 35.155 kb on - strand, within GFF4892
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 33,145 - GFF4890 0.23 +0.8 33,244 + GFF4890 0.35 +0.0 33,245 - GFF4890 0.35 -0.2 33,504 + GFF4890 0.67 -0.2 33,514 + GFF4890 0.68 +0.3 33,515 - GFF4890 0.69 -0.5 33,529 + GFF4890 0.70 +0.1 33,529 + GFF4890 0.70 -0.1 33,529 + GFF4890 0.70 -1.2 33,530 - GFF4890 0.70 -1.1 33,793 + -1.5 33,794 - +0.1 34,130 - GFF4891 0.82 -0.5 34,419 + GFF4892 0.12 +0.6 34,420 - GFF4892 0.12 +0.3 34,473 + GFF4892 0.16 +0.0 34,491 - GFF4892 0.18 -2.4 34,521 + GFF4892 0.20 -0.5 34,639 + GFF4892 0.29 -0.5 34,640 - GFF4892 0.29 +0.8 34,683 + GFF4892 0.32 +0.1 34,683 + GFF4892 0.32 +0.7 34,734 + GFF4892 0.36 +0.7 34,734 + GFF4892 0.36 +1.0 34,734 + GFF4892 0.36 -0.2 34,734 + GFF4892 0.36 -0.6 34,735 - GFF4892 0.36 +0.2 34,735 - GFF4892 0.36 +1.0 34,804 + GFF4892 0.41 +0.7 34,804 + GFF4892 0.41 -0.0 34,804 + GFF4892 0.41 +0.5 34,804 + GFF4892 0.41 +0.0 34,804 + GFF4892 0.41 +2.3 34,804 + GFF4892 0.41 -1.2 34,804 + GFF4892 0.41 -0.0 34,804 + GFF4892 0.41 +0.5 34,804 + GFF4892 0.41 +0.0 34,804 + GFF4892 0.41 +1.0 34,805 - GFF4892 0.42 -0.3 34,805 - GFF4892 0.42 +0.6 34,805 - GFF4892 0.42 -0.1 34,805 - GFF4892 0.42 +0.5 34,805 - GFF4892 0.42 +0.1 34,805 - GFF4892 0.42 -0.3 34,805 - GFF4892 0.42 +0.6 34,805 - GFF4892 0.42 -0.3 34,806 + GFF4892 0.42 -0.5 34,881 + GFF4892 0.47 +0.3 34,882 - GFF4892 0.47 +0.2 35,001 + GFF4892 0.56 +0.7 35,154 + GFF4892 0.68 -1.0 35,154 + GFF4892 0.68 +0.6 35,155 - GFF4892 0.68 +0.2 35,155 - GFF4892 0.68 +0.2 35,155 - GFF4892 0.68 -0.0 35,155 - GFF4892 0.68 -0.3
Or see this region's nucleotide sequence