Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4821 and GFF4822 are separated by 203 nucleotides GFF4822 and GFF4823 are separated by 227 nucleotides GFF4823 and GFF4824 are separated by 0 nucleotides
GFF4821 - hypothetical protein, at 62,245 to 62,673
GFF4821
GFF4822 - hypothetical protein, at 62,877 to 63,263
GFF4822
GFF4823 - hypothetical protein, at 63,491 to 64,423
GFF4823
GFF4824 - hypothetical protein, at 64,424 to 64,924
GFF4824
Position (kb) 63
64
65 Strain fitness (log2 ratio) -2
-1
0
1
2 at 62.671 kb on + strand at 62.672 kb on - strand at 62.672 kb on - strand at 62.672 kb on - strand at 62.828 kb on + strand at 62.828 kb on + strand at 62.829 kb on - strand at 62.883 kb on + strand at 62.883 kb on + strand at 62.883 kb on + strand at 62.883 kb on + strand at 62.884 kb on - strand at 62.884 kb on - strand at 63.078 kb on + strand, within GFF4822 at 63.078 kb on + strand, within GFF4822 at 63.078 kb on + strand, within GFF4822 at 63.078 kb on + strand, within GFF4822 at 63.078 kb on + strand, within GFF4822 at 63.079 kb on - strand, within GFF4822 at 63.121 kb on - strand, within GFF4822 at 63.121 kb on - strand, within GFF4822 at 63.160 kb on - strand, within GFF4822 at 63.174 kb on + strand, within GFF4822 at 63.174 kb on + strand, within GFF4822 at 63.177 kb on - strand, within GFF4822 at 63.262 kb on - strand at 63.349 kb on + strand at 63.349 kb on + strand at 63.350 kb on - strand at 63.350 kb on - strand at 63.351 kb on + strand at 63.352 kb on - strand at 63.352 kb on - strand at 63.352 kb on - strand at 63.352 kb on - strand at 63.404 kb on + strand at 63.404 kb on + strand at 63.492 kb on + strand at 63.492 kb on + strand at 63.493 kb on - strand at 63.528 kb on - strand at 63.555 kb on + strand at 63.555 kb on + strand at 63.556 kb on - strand at 63.556 kb on - strand at 63.639 kb on + strand, within GFF4823 at 63.639 kb on + strand, within GFF4823 at 63.639 kb on + strand, within GFF4823 at 63.639 kb on + strand, within GFF4823 at 63.639 kb on + strand, within GFF4823 at 63.639 kb on + strand, within GFF4823 at 63.640 kb on - strand, within GFF4823 at 63.640 kb on - strand, within GFF4823 at 63.640 kb on - strand, within GFF4823 at 63.640 kb on - strand, within GFF4823 at 63.640 kb on - strand, within GFF4823 at 63.644 kb on - strand, within GFF4823 at 63.762 kb on + strand, within GFF4823 at 63.762 kb on + strand, within GFF4823 at 63.763 kb on - strand, within GFF4823 at 63.819 kb on + strand, within GFF4823 at 63.819 kb on + strand, within GFF4823 at 63.819 kb on + strand, within GFF4823 at 63.820 kb on - strand, within GFF4823 at 63.873 kb on + strand, within GFF4823 at 63.873 kb on + strand, within GFF4823 at 63.873 kb on + strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.874 kb on - strand, within GFF4823 at 63.918 kb on + strand, within GFF4823 at 63.969 kb on + strand, within GFF4823 at 63.970 kb on - strand, within GFF4823 at 64.024 kb on + strand, within GFF4823 at 64.025 kb on - strand, within GFF4823 at 64.042 kb on + strand, within GFF4823 at 64.043 kb on - strand, within GFF4823 at 64.068 kb on + strand, within GFF4823 at 64.068 kb on + strand, within GFF4823 at 64.068 kb on + strand, within GFF4823 at 64.068 kb on + strand, within GFF4823 at 64.068 kb on + strand, within GFF4823 at 64.069 kb on - strand, within GFF4823 at 64.160 kb on - strand, within GFF4823 at 64.160 kb on - strand, within GFF4823 at 64.257 kb on + strand, within GFF4823 at 64.258 kb on - strand, within GFF4823 at 64.258 kb on - strand, within GFF4823 at 64.287 kb on + strand, within GFF4823 at 64.287 kb on + strand, within GFF4823 at 64.339 kb on - strand at 64.360 kb on - strand at 64.360 kb on - strand at 64.426 kb on - strand at 64.426 kb on - strand at 64.426 kb on - strand at 64.449 kb on + strand at 64.449 kb on + strand at 64.449 kb on + strand at 64.449 kb on + strand at 64.449 kb on + strand at 64.450 kb on - strand at 64.450 kb on - strand at 64.474 kb on - strand, within GFF4824 at 64.494 kb on + strand, within GFF4824 at 64.494 kb on + strand, within GFF4824 at 64.495 kb on - strand, within GFF4824 at 64.495 kb on - strand, within GFF4824 at 64.507 kb on + strand, within GFF4824 at 64.508 kb on - strand, within GFF4824 at 64.508 kb on - strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.653 kb on + strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.654 kb on - strand, within GFF4824 at 64.667 kb on - strand, within GFF4824 at 64.741 kb on - strand, within GFF4824 at 64.741 kb on - strand, within GFF4824 at 64.741 kb on - strand, within GFF4824 at 64.799 kb on + strand, within GFF4824 at 64.968 kb on + strand at 64.969 kb on - strand at 64.969 kb on - strand at 64.969 kb on - strand at 64.969 kb on - strand at 64.969 kb on - strand at 64.974 kb on + strand at 64.974 kb on + strand at 65.019 kb on - strand at 65.019 kb on - strand at 65.102 kb on + strand at 65.102 kb on + strand at 65.103 kb on - strand at 65.103 kb on - strand at 65.192 kb on + strand at 65.192 kb on + strand at 65.192 kb on + strand at 65.221 kb on + strand at 65.221 kb on + strand at 65.221 kb on + strand at 65.221 kb on + strand at 65.222 kb on - strand at 65.222 kb on - strand at 65.243 kb on + strand at 65.285 kb on + strand at 65.286 kb on - strand at 65.286 kb on - strand at 65.286 kb on - strand at 65.286 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 62,671 + +0.5 62,672 - -0.2 62,672 - +0.8 62,672 - +0.4 62,828 + +0.2 62,828 + -0.2 62,829 - +0.1 62,883 + +0.3 62,883 + +1.2 62,883 + +1.2 62,883 + +0.5 62,884 - +1.0 62,884 - +0.4 63,078 + GFF4822 0.52 +0.2 63,078 + GFF4822 0.52 +0.3 63,078 + GFF4822 0.52 -0.1 63,078 + GFF4822 0.52 -0.4 63,078 + GFF4822 0.52 -0.6 63,079 - GFF4822 0.52 -0.1 63,121 - GFF4822 0.63 -1.1 63,121 - GFF4822 0.63 -0.4 63,160 - GFF4822 0.73 -0.2 63,174 + GFF4822 0.77 -0.2 63,174 + GFF4822 0.77 -0.5 63,177 - GFF4822 0.78 +0.6 63,262 - -1.1 63,349 + +0.4 63,349 + +0.3 63,350 - -0.3 63,350 - +0.5 63,351 + -1.3 63,352 - -0.7 63,352 - -1.5 63,352 - +0.2 63,352 - -0.7 63,404 + +1.7 63,404 + -0.5 63,492 + -0.2 63,492 + +0.1 63,493 - +0.9 63,528 - +1.1 63,555 + +0.8 63,555 + -0.3 63,556 - +0.1 63,556 - -0.0 63,639 + GFF4823 0.16 -0.4 63,639 + GFF4823 0.16 +0.1 63,639 + GFF4823 0.16 -0.5 63,639 + GFF4823 0.16 -0.3 63,639 + GFF4823 0.16 +0.4 63,639 + GFF4823 0.16 +0.6 63,640 - GFF4823 0.16 -0.7 63,640 - GFF4823 0.16 +0.7 63,640 - GFF4823 0.16 -0.2 63,640 - GFF4823 0.16 +1.1 63,640 - GFF4823 0.16 +0.5 63,644 - GFF4823 0.16 -0.8 63,762 + GFF4823 0.29 +0.1 63,762 + GFF4823 0.29 +0.6 63,763 - GFF4823 0.29 -0.9 63,819 + GFF4823 0.35 +1.1 63,819 + GFF4823 0.35 +1.1 63,819 + GFF4823 0.35 +1.0 63,820 - GFF4823 0.35 -0.0 63,873 + GFF4823 0.41 +0.7 63,873 + GFF4823 0.41 +0.2 63,873 + GFF4823 0.41 +0.7 63,874 - GFF4823 0.41 -0.8 63,874 - GFF4823 0.41 +1.0 63,874 - GFF4823 0.41 +0.9 63,874 - GFF4823 0.41 -0.0 63,874 - GFF4823 0.41 +0.7 63,874 - GFF4823 0.41 +0.0 63,874 - GFF4823 0.41 -0.6 63,874 - GFF4823 0.41 -0.6 63,918 + GFF4823 0.46 +0.6 63,969 + GFF4823 0.51 +1.3 63,970 - GFF4823 0.51 +0.6 64,024 + GFF4823 0.57 +0.8 64,025 - GFF4823 0.57 -0.2 64,042 + GFF4823 0.59 +0.2 64,043 - GFF4823 0.59 +0.0 64,068 + GFF4823 0.62 +0.7 64,068 + GFF4823 0.62 +0.8 64,068 + GFF4823 0.62 -0.3 64,068 + GFF4823 0.62 -0.3 64,068 + GFF4823 0.62 +0.6 64,069 - GFF4823 0.62 -1.0 64,160 - GFF4823 0.72 +0.1 64,160 - GFF4823 0.72 +0.6 64,257 + GFF4823 0.82 -0.5 64,258 - GFF4823 0.82 +0.3 64,258 - GFF4823 0.82 +1.1 64,287 + GFF4823 0.85 -0.8 64,287 + GFF4823 0.85 -0.8 64,339 - +0.5 64,360 - -0.1 64,360 - +0.4 64,426 - +0.6 64,426 - +0.4 64,426 - +1.4 64,449 + +0.7 64,449 + +0.6 64,449 + -1.5 64,449 + +0.0 64,449 + -0.6 64,450 - +0.4 64,450 - -0.5 64,474 - GFF4824 0.10 +0.2 64,494 + GFF4824 0.14 -0.1 64,494 + GFF4824 0.14 +0.6 64,495 - GFF4824 0.14 +1.3 64,495 - GFF4824 0.14 -0.9 64,507 + GFF4824 0.17 -0.2 64,508 - GFF4824 0.17 -0.9 64,508 - GFF4824 0.17 -0.2 64,653 + GFF4824 0.46 -2.0 64,653 + GFF4824 0.46 +0.3 64,653 + GFF4824 0.46 +0.9 64,653 + GFF4824 0.46 -0.3 64,653 + GFF4824 0.46 +0.8 64,653 + GFF4824 0.46 +0.1 64,654 - GFF4824 0.46 +2.5 64,654 - GFF4824 0.46 +0.1 64,654 - GFF4824 0.46 -0.3 64,654 - GFF4824 0.46 -0.7 64,654 - GFF4824 0.46 +0.9 64,654 - GFF4824 0.46 -0.0 64,654 - GFF4824 0.46 -0.3 64,667 - GFF4824 0.49 +0.2 64,741 - GFF4824 0.63 +0.8 64,741 - GFF4824 0.63 +0.7 64,741 - GFF4824 0.63 -0.1 64,799 + GFF4824 0.75 -1.0 64,968 + -0.4 64,969 - -0.6 64,969 - -0.2 64,969 - +0.2 64,969 - -1.0 64,969 - -0.7 64,974 + +0.8 64,974 + -0.4 65,019 - -0.2 65,019 - -1.1 65,102 + +0.0 65,102 + -0.4 65,103 - +0.6 65,103 - +0.7 65,192 + -0.3 65,192 + +1.7 65,192 + -0.5 65,221 + +0.0 65,221 + -1.4 65,221 + -0.3 65,221 + +0.9 65,222 - -0.2 65,222 - +0.4 65,243 + -0.3 65,285 + -0.4 65,286 - -0.8 65,286 - -0.4 65,286 - -0.9 65,286 - -0.9
Or see this region's nucleotide sequence