Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4777 and GFF4778 are separated by 41 nucleotides GFF4778 and GFF4779 are separated by 35 nucleotides GFF4779 and GFF4780 are separated by 4 nucleotides
GFF4777 - 1,3-propanediol dehydrogenase, at 17,458 to 18,597
GFF4777
GFF4778 - Acetyl-CoA:oxalate CoA-transferase, at 18,639 to 19,781
GFF4778
GFF4779 - hypothetical protein, at 19,817 to 20,209
GFF4779
GFF4780 - hypothetical protein, at 20,214 to 21,374
GFF4780
Position (kb) 18
19
20 Strain fitness (log2 ratio) -2
-1
0
1 at 17.698 kb on - strand, within GFF4777 at 17.812 kb on + strand, within GFF4777 at 17.812 kb on + strand, within GFF4777 at 17.812 kb on + strand, within GFF4777 at 17.812 kb on + strand, within GFF4777 at 17.812 kb on + strand, within GFF4777 at 17.812 kb on + strand, within GFF4777 at 17.813 kb on - strand, within GFF4777 at 17.813 kb on - strand, within GFF4777 at 17.813 kb on - strand, within GFF4777 at 17.813 kb on - strand, within GFF4777 at 17.813 kb on - strand, within GFF4777 at 17.883 kb on + strand, within GFF4777 at 17.884 kb on - strand, within GFF4777 at 17.978 kb on + strand, within GFF4777 at 17.978 kb on + strand, within GFF4777 at 17.978 kb on + strand, within GFF4777 at 17.978 kb on + strand, within GFF4777 at 17.978 kb on + strand, within GFF4777 at 17.978 kb on + strand, within GFF4777 at 17.979 kb on - strand, within GFF4777 at 17.993 kb on + strand, within GFF4777 at 17.993 kb on + strand, within GFF4777 at 17.993 kb on + strand, within GFF4777 at 17.993 kb on + strand, within GFF4777 at 17.993 kb on + strand, within GFF4777 at 17.994 kb on - strand, within GFF4777 at 17.994 kb on - strand, within GFF4777 at 18.042 kb on + strand, within GFF4777 at 18.042 kb on + strand, within GFF4777 at 18.043 kb on - strand, within GFF4777 at 18.043 kb on - strand, within GFF4777 at 18.043 kb on - strand, within GFF4777 at 18.248 kb on + strand, within GFF4777 at 18.248 kb on + strand, within GFF4777 at 18.496 kb on + strand at 18.496 kb on + strand at 18.496 kb on + strand at 18.497 kb on - strand at 18.497 kb on - strand at 19.069 kb on + strand, within GFF4778 at 19.069 kb on + strand, within GFF4778 at 19.069 kb on + strand, within GFF4778 at 19.069 kb on + strand, within GFF4778 at 19.069 kb on + strand, within GFF4778 at 19.069 kb on + strand, within GFF4778 at 19.069 kb on + strand, within GFF4778 at 19.069 kb on + strand, within GFF4778 at 19.069 kb on + strand, within GFF4778 at 19.069 kb on + strand, within GFF4778 at 19.070 kb on - strand, within GFF4778 at 19.070 kb on - strand, within GFF4778 at 19.070 kb on - strand, within GFF4778 at 19.070 kb on - strand, within GFF4778 at 19.070 kb on - strand, within GFF4778 at 19.070 kb on - strand, within GFF4778 at 19.070 kb on - strand, within GFF4778 at 19.090 kb on + strand, within GFF4778 at 19.091 kb on - strand, within GFF4778 at 19.091 kb on - strand, within GFF4778 at 19.100 kb on - strand, within GFF4778 at 19.103 kb on - strand, within GFF4778 at 19.254 kb on + strand, within GFF4778 at 19.255 kb on - strand, within GFF4778 at 19.282 kb on + strand, within GFF4778 at 19.282 kb on + strand, within GFF4778 at 19.283 kb on - strand, within GFF4778 at 19.380 kb on - strand, within GFF4778 at 19.380 kb on - strand, within GFF4778 at 19.381 kb on + strand, within GFF4778 at 19.382 kb on - strand, within GFF4778 at 19.382 kb on - strand, within GFF4778 at 19.382 kb on - strand, within GFF4778 at 19.447 kb on + strand, within GFF4778 at 19.447 kb on + strand, within GFF4778 at 19.447 kb on + strand, within GFF4778 at 19.447 kb on + strand, within GFF4778 at 19.448 kb on - strand, within GFF4778 at 19.448 kb on - strand, within GFF4778 at 19.448 kb on - strand, within GFF4778 at 19.448 kb on - strand, within GFF4778 at 19.560 kb on + strand, within GFF4778 at 19.560 kb on + strand, within GFF4778 at 19.560 kb on + strand, within GFF4778 at 19.561 kb on - strand, within GFF4778 at 19.561 kb on - strand, within GFF4778 at 19.561 kb on - strand, within GFF4778 at 19.561 kb on - strand, within GFF4778 at 19.630 kb on + strand, within GFF4778 at 19.630 kb on + strand, within GFF4778 at 19.630 kb on + strand, within GFF4778 at 19.630 kb on + strand, within GFF4778 at 19.631 kb on - strand, within GFF4778 at 19.877 kb on + strand, within GFF4779 at 19.877 kb on + strand, within GFF4779 at 19.878 kb on - strand, within GFF4779 at 19.968 kb on + strand, within GFF4779 at 19.969 kb on - strand, within GFF4779 at 19.969 kb on - strand, within GFF4779 at 19.969 kb on - strand, within GFF4779 at 19.969 kb on - strand, within GFF4779 at 19.980 kb on + strand, within GFF4779 at 20.010 kb on + strand, within GFF4779 at 20.011 kb on - strand, within GFF4779 at 20.011 kb on - strand, within GFF4779 at 20.011 kb on - strand, within GFF4779 at 20.016 kb on + strand, within GFF4779 at 20.016 kb on + strand, within GFF4779 at 20.017 kb on - strand, within GFF4779 at 20.088 kb on + strand, within GFF4779 at 20.089 kb on - strand, within GFF4779 at 20.099 kb on + strand, within GFF4779 at 20.099 kb on + strand, within GFF4779 at 20.100 kb on - strand, within GFF4779 at 20.100 kb on - strand, within GFF4779 at 20.100 kb on - strand, within GFF4779 at 20.154 kb on + strand, within GFF4779 at 20.155 kb on - strand, within GFF4779 at 20.155 kb on - strand, within GFF4779 at 20.414 kb on + strand, within GFF4780 at 20.414 kb on + strand, within GFF4780 at 20.539 kb on + strand, within GFF4780 at 20.551 kb on + strand, within GFF4780 at 20.551 kb on + strand, within GFF4780 at 20.551 kb on + strand, within GFF4780 at 20.552 kb on - strand, within GFF4780 at 20.552 kb on - strand, within GFF4780 at 20.552 kb on - strand, within GFF4780 at 20.552 kb on - strand, within GFF4780 at 20.552 kb on - strand, within GFF4780
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 17,698 - GFF4777 0.21 +0.1 17,812 + GFF4777 0.31 -0.8 17,812 + GFF4777 0.31 +0.3 17,812 + GFF4777 0.31 +0.9 17,812 + GFF4777 0.31 -0.3 17,812 + GFF4777 0.31 +1.3 17,812 + GFF4777 0.31 +0.8 17,813 - GFF4777 0.31 -0.8 17,813 - GFF4777 0.31 +0.5 17,813 - GFF4777 0.31 -1.0 17,813 - GFF4777 0.31 -0.5 17,813 - GFF4777 0.31 +0.1 17,883 + GFF4777 0.37 -0.8 17,884 - GFF4777 0.37 -0.2 17,978 + GFF4777 0.46 -2.2 17,978 + GFF4777 0.46 -0.5 17,978 + GFF4777 0.46 -0.9 17,978 + GFF4777 0.46 -1.0 17,978 + GFF4777 0.46 -0.6 17,978 + GFF4777 0.46 +0.4 17,979 - GFF4777 0.46 -0.4 17,993 + GFF4777 0.47 +0.2 17,993 + GFF4777 0.47 -0.1 17,993 + GFF4777 0.47 -0.1 17,993 + GFF4777 0.47 +0.3 17,993 + GFF4777 0.47 -0.8 17,994 - GFF4777 0.47 +0.9 17,994 - GFF4777 0.47 -0.4 18,042 + GFF4777 0.51 -0.6 18,042 + GFF4777 0.51 +0.3 18,043 - GFF4777 0.51 +0.6 18,043 - GFF4777 0.51 -1.2 18,043 - GFF4777 0.51 +0.7 18,248 + GFF4777 0.69 +0.5 18,248 + GFF4777 0.69 -0.0 18,496 + +0.1 18,496 + -0.4 18,496 + +0.6 18,497 - -0.8 18,497 - -0.2 19,069 + GFF4778 0.38 +0.3 19,069 + GFF4778 0.38 -0.4 19,069 + GFF4778 0.38 +0.2 19,069 + GFF4778 0.38 -1.3 19,069 + GFF4778 0.38 +0.6 19,069 + GFF4778 0.38 +0.0 19,069 + GFF4778 0.38 -1.5 19,069 + GFF4778 0.38 +0.3 19,069 + GFF4778 0.38 +0.4 19,069 + GFF4778 0.38 -0.1 19,070 - GFF4778 0.38 -2.0 19,070 - GFF4778 0.38 -0.5 19,070 - GFF4778 0.38 -0.2 19,070 - GFF4778 0.38 -1.1 19,070 - GFF4778 0.38 -0.9 19,070 - GFF4778 0.38 -1.4 19,070 - GFF4778 0.38 -0.4 19,090 + GFF4778 0.39 -0.8 19,091 - GFF4778 0.40 -1.2 19,091 - GFF4778 0.40 -0.1 19,100 - GFF4778 0.40 +0.6 19,103 - GFF4778 0.41 +0.5 19,254 + GFF4778 0.54 -0.2 19,255 - GFF4778 0.54 -1.8 19,282 + GFF4778 0.56 +0.0 19,282 + GFF4778 0.56 +0.9 19,283 - GFF4778 0.56 -0.3 19,380 - GFF4778 0.65 -0.9 19,380 - GFF4778 0.65 +0.4 19,381 + GFF4778 0.65 -0.4 19,382 - GFF4778 0.65 -0.6 19,382 - GFF4778 0.65 +1.3 19,382 - GFF4778 0.65 +0.6 19,447 + GFF4778 0.71 -0.3 19,447 + GFF4778 0.71 -0.4 19,447 + GFF4778 0.71 +1.0 19,447 + GFF4778 0.71 +0.1 19,448 - GFF4778 0.71 +1.0 19,448 - GFF4778 0.71 +0.4 19,448 - GFF4778 0.71 +0.6 19,448 - GFF4778 0.71 -0.9 19,560 + GFF4778 0.81 -0.1 19,560 + GFF4778 0.81 -0.2 19,560 + GFF4778 0.81 -1.8 19,561 - GFF4778 0.81 +0.2 19,561 - GFF4778 0.81 -0.3 19,561 - GFF4778 0.81 +0.1 19,561 - GFF4778 0.81 +0.8 19,630 + GFF4778 0.87 +0.4 19,630 + GFF4778 0.87 -0.4 19,630 + GFF4778 0.87 -1.0 19,630 + GFF4778 0.87 -0.4 19,631 - GFF4778 0.87 -0.8 19,877 + GFF4779 0.15 +0.1 19,877 + GFF4779 0.15 -0.1 19,878 - GFF4779 0.16 -0.7 19,968 + GFF4779 0.38 -0.4 19,969 - GFF4779 0.39 -0.2 19,969 - GFF4779 0.39 -0.1 19,969 - GFF4779 0.39 +0.5 19,969 - GFF4779 0.39 +1.0 19,980 + GFF4779 0.41 -0.3 20,010 + GFF4779 0.49 +0.2 20,011 - GFF4779 0.49 +0.9 20,011 - GFF4779 0.49 +0.3 20,011 - GFF4779 0.49 +0.5 20,016 + GFF4779 0.51 +0.1 20,016 + GFF4779 0.51 -0.6 20,017 - GFF4779 0.51 +0.7 20,088 + GFF4779 0.69 -1.2 20,089 - GFF4779 0.69 +1.3 20,099 + GFF4779 0.72 -1.2 20,099 + GFF4779 0.72 -0.4 20,100 - GFF4779 0.72 -0.9 20,100 - GFF4779 0.72 +0.1 20,100 - GFF4779 0.72 -0.3 20,154 + GFF4779 0.86 -1.3 20,155 - GFF4779 0.86 +0.0 20,155 - GFF4779 0.86 -0.9 20,414 + GFF4780 0.17 -0.0 20,414 + GFF4780 0.17 -0.2 20,539 + GFF4780 0.28 -0.0 20,551 + GFF4780 0.29 -0.4 20,551 + GFF4780 0.29 -0.3 20,551 + GFF4780 0.29 -0.8 20,552 - GFF4780 0.29 -0.1 20,552 - GFF4780 0.29 +1.1 20,552 - GFF4780 0.29 -0.4 20,552 - GFF4780 0.29 -0.6 20,552 - GFF4780 0.29 -0.5
Or see this region's nucleotide sequence