Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4552 and GFF4553 are separated by 231 nucleotides GFF4553 and GFF4554 are separated by 67 nucleotides
GFF4552 - Ferredoxin--NADP reductase, at 134,513 to 135,286
GFF4552
GFF4553 - Glutathione S-transferase GST-6.0, at 135,518 to 136,153
GFF4553
GFF4554 - Calcium-transporting ATPase, at 136,221 to 139,043
GFF4554
Position (kb) 135
136
137 Strain fitness (log2 ratio) -2
-1
0
1 at 134.669 kb on + strand, within GFF4552 at 134.670 kb on - strand, within GFF4552 at 134.672 kb on + strand, within GFF4552 at 134.844 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.907 kb on - strand, within GFF4552 at 134.967 kb on - strand, within GFF4552 at 135.039 kb on - strand, within GFF4552 at 135.039 kb on - strand, within GFF4552 at 135.039 kb on - strand, within GFF4552 at 135.041 kb on + strand, within GFF4552 at 135.042 kb on - strand, within GFF4552 at 135.111 kb on - strand, within GFF4552 at 135.254 kb on + strand at 135.254 kb on + strand at 135.254 kb on + strand at 135.254 kb on + strand at 135.255 kb on - strand at 135.284 kb on + strand at 135.647 kb on + strand, within GFF4553 at 135.872 kb on + strand, within GFF4553 at 135.872 kb on + strand, within GFF4553 at 136.029 kb on - strand, within GFF4553 at 136.030 kb on + strand, within GFF4553 at 136.171 kb on - strand at 136.214 kb on + strand at 136.431 kb on - strand at 136.498 kb on - strand at 136.548 kb on + strand, within GFF4554 at 136.549 kb on - strand, within GFF4554 at 136.549 kb on - strand, within GFF4554 at 136.863 kb on + strand, within GFF4554 at 136.993 kb on + strand, within GFF4554
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 134,669 + GFF4552 0.20 -0.7 134,670 - GFF4552 0.20 -0.4 134,672 + GFF4552 0.21 +1.1 134,844 - GFF4552 0.43 -0.2 134,907 - GFF4552 0.51 +0.8 134,907 - GFF4552 0.51 +0.6 134,907 - GFF4552 0.51 -1.8 134,907 - GFF4552 0.51 -0.6 134,907 - GFF4552 0.51 -0.4 134,907 - GFF4552 0.51 -0.1 134,967 - GFF4552 0.59 -0.5 135,039 - GFF4552 0.68 -1.1 135,039 - GFF4552 0.68 -1.4 135,039 - GFF4552 0.68 +0.6 135,041 + GFF4552 0.68 -0.3 135,042 - GFF4552 0.68 -1.4 135,111 - GFF4552 0.77 +1.2 135,254 + +0.1 135,254 + -0.2 135,254 + +0.4 135,254 + -0.7 135,255 - -0.6 135,284 + +0.1 135,647 + GFF4553 0.20 -0.5 135,872 + GFF4553 0.56 +0.6 135,872 + GFF4553 0.56 -1.3 136,029 - GFF4553 0.80 -0.4 136,030 + GFF4553 0.81 -1.9 136,171 - -0.3 136,214 + +0.1 136,431 - -0.7 136,498 - -0.7 136,548 + GFF4554 0.12 +0.4 136,549 - GFF4554 0.12 -1.3 136,549 - GFF4554 0.12 -0.2 136,863 + GFF4554 0.23 -0.0 136,993 + GFF4554 0.27 +0.1
Or see this region's nucleotide sequence