Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4501 and GFF4502 are separated by 1 nucleotides GFF4502 and GFF4503 overlap by 4 nucleotides GFF4503 and GFF4504 are separated by 109 nucleotides
GFF4501 - hypothetical protein, at 76,995 to 77,759
GFF4501
GFF4502 - Flagellar basal-body rod protein FlgG, at 77,761 to 78,483
GFF4502
GFF4503 - putative secretion system apparatus ATP synthase SsaN, at 78,480 to 79,832
GFF4503
GFF4504 - Flagellar hook protein FlgE, at 79,942 to 81,198
GFF4504
Position (kb) 78
79
80 Strain fitness (log2 ratio) -2
-1
0
1 at 77.520 kb on + strand, within GFF4501 at 77.520 kb on + strand, within GFF4501 at 77.520 kb on + strand, within GFF4501 at 77.520 kb on + strand, within GFF4501 at 77.521 kb on - strand, within GFF4501 at 77.521 kb on - strand, within GFF4501 at 77.749 kb on - strand at 77.749 kb on - strand at 77.777 kb on - strand at 77.777 kb on - strand at 77.944 kb on + strand, within GFF4502 at 77.945 kb on - strand, within GFF4502 at 78.049 kb on + strand, within GFF4502 at 78.049 kb on + strand, within GFF4502 at 78.050 kb on - strand, within GFF4502 at 78.072 kb on + strand, within GFF4502 at 78.072 kb on + strand, within GFF4502 at 78.072 kb on + strand, within GFF4502 at 78.072 kb on + strand, within GFF4502 at 78.072 kb on + strand, within GFF4502 at 78.072 kb on + strand, within GFF4502 at 78.073 kb on - strand, within GFF4502 at 78.073 kb on - strand, within GFF4502 at 78.313 kb on + strand, within GFF4502 at 78.313 kb on + strand, within GFF4502 at 78.314 kb on - strand, within GFF4502 at 78.589 kb on + strand at 78.590 kb on - strand at 78.590 kb on - strand at 78.764 kb on + strand, within GFF4503 at 78.972 kb on - strand, within GFF4503 at 79.297 kb on - strand, within GFF4503 at 79.356 kb on + strand, within GFF4503 at 79.357 kb on - strand, within GFF4503 at 79.752 kb on + strand at 79.752 kb on + strand at 79.752 kb on + strand at 79.753 kb on - strand at 80.047 kb on + strand at 80.047 kb on + strand at 80.104 kb on + strand, within GFF4504 at 80.104 kb on + strand, within GFF4504 at 80.104 kb on + strand, within GFF4504 at 80.105 kb on - strand, within GFF4504 at 80.125 kb on - strand, within GFF4504 at 80.125 kb on - strand, within GFF4504 at 80.125 kb on - strand, within GFF4504 at 80.167 kb on + strand, within GFF4504 at 80.167 kb on + strand, within GFF4504 at 80.167 kb on + strand, within GFF4504 at 80.168 kb on - strand, within GFF4504 at 80.168 kb on - strand, within GFF4504 at 80.168 kb on - strand, within GFF4504 at 80.168 kb on - strand, within GFF4504 at 80.323 kb on + strand, within GFF4504 at 80.323 kb on + strand, within GFF4504 at 80.324 kb on - strand, within GFF4504 at 80.324 kb on - strand, within GFF4504 at 80.386 kb on - strand, within GFF4504 at 80.386 kb on - strand, within GFF4504 at 80.620 kb on + strand, within GFF4504 at 80.659 kb on + strand, within GFF4504 at 80.659 kb on + strand, within GFF4504 at 80.660 kb on - strand, within GFF4504 at 80.803 kb on + strand, within GFF4504 at 80.804 kb on - strand, within GFF4504 at 80.804 kb on - strand, within GFF4504
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 77,520 + GFF4501 0.69 -0.4 77,520 + GFF4501 0.69 -0.2 77,520 + GFF4501 0.69 +1.2 77,520 + GFF4501 0.69 +0.0 77,521 - GFF4501 0.69 -1.3 77,521 - GFF4501 0.69 -0.1 77,749 - +0.6 77,749 - -0.1 77,777 - -1.4 77,777 - +0.1 77,944 + GFF4502 0.25 -0.1 77,945 - GFF4502 0.25 -0.4 78,049 + GFF4502 0.40 +0.3 78,049 + GFF4502 0.40 -0.7 78,050 - GFF4502 0.40 +0.1 78,072 + GFF4502 0.43 +1.1 78,072 + GFF4502 0.43 +0.1 78,072 + GFF4502 0.43 -0.9 78,072 + GFF4502 0.43 +0.2 78,072 + GFF4502 0.43 +0.0 78,072 + GFF4502 0.43 -0.1 78,073 - GFF4502 0.43 +0.6 78,073 - GFF4502 0.43 +0.5 78,313 + GFF4502 0.76 +0.5 78,313 + GFF4502 0.76 -0.9 78,314 - GFF4502 0.76 -0.4 78,589 + -0.0 78,590 - -0.3 78,590 - +0.6 78,764 + GFF4503 0.21 -0.4 78,972 - GFF4503 0.36 +0.4 79,297 - GFF4503 0.60 +0.1 79,356 + GFF4503 0.65 -0.1 79,357 - GFF4503 0.65 +0.1 79,752 + +0.7 79,752 + -0.6 79,752 + +0.3 79,753 - -0.6 80,047 + -0.2 80,047 + -0.0 80,104 + GFF4504 0.13 +1.2 80,104 + GFF4504 0.13 -0.2 80,104 + GFF4504 0.13 -1.4 80,105 - GFF4504 0.13 -0.2 80,125 - GFF4504 0.15 +0.6 80,125 - GFF4504 0.15 -0.2 80,125 - GFF4504 0.15 -0.7 80,167 + GFF4504 0.18 -1.1 80,167 + GFF4504 0.18 +0.1 80,167 + GFF4504 0.18 +0.8 80,168 - GFF4504 0.18 -0.4 80,168 - GFF4504 0.18 -1.0 80,168 - GFF4504 0.18 -0.5 80,168 - GFF4504 0.18 -0.2 80,323 + GFF4504 0.30 -0.1 80,323 + GFF4504 0.30 -0.2 80,324 - GFF4504 0.30 -0.3 80,324 - GFF4504 0.30 -2.2 80,386 - GFF4504 0.35 +0.2 80,386 - GFF4504 0.35 +0.3 80,620 + GFF4504 0.54 +0.1 80,659 + GFF4504 0.57 -1.4 80,659 + GFF4504 0.57 +0.7 80,660 - GFF4504 0.57 +0.8 80,803 + GFF4504 0.68 -0.1 80,804 - GFF4504 0.69 +0.6 80,804 - GFF4504 0.69 -1.4
Or see this region's nucleotide sequence