Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4484 and GFF4485 overlap by 4 nucleotides GFF4485 and GFF4486 are separated by 4 nucleotides GFF4486 and GFF4487 overlap by 1 nucleotides
GFF4484 - Flagellar biosynthetic protein FliP, at 64,844 to 65,671
GFF4484
GFF4485 - hypothetical protein, at 65,668 to 66,177
GFF4485
GFF4486 - Flagellar L-ring protein, at 66,182 to 66,919
GFF4486
GFF4487 - hypothetical protein, at 66,919 to 67,605
GFF4487
Position (kb) 65
66
67 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 64.802 kb on + strand at 64.803 kb on - strand at 64.835 kb on - strand at 65.084 kb on + strand, within GFF4484 at 65.084 kb on + strand, within GFF4484 at 65.084 kb on + strand, within GFF4484 at 65.085 kb on - strand, within GFF4484 at 65.085 kb on - strand, within GFF4484 at 65.322 kb on + strand, within GFF4484 at 65.323 kb on - strand, within GFF4484 at 65.323 kb on - strand, within GFF4484 at 65.323 kb on - strand, within GFF4484 at 65.403 kb on + strand, within GFF4484 at 65.570 kb on + strand, within GFF4484 at 65.570 kb on + strand, within GFF4484 at 65.807 kb on + strand, within GFF4485 at 65.807 kb on + strand, within GFF4485 at 65.808 kb on - strand, within GFF4485 at 65.808 kb on - strand, within GFF4485 at 66.204 kb on + strand at 66.204 kb on + strand at 66.204 kb on + strand at 66.204 kb on + strand at 66.205 kb on - strand at 66.205 kb on - strand at 66.205 kb on - strand at 66.205 kb on - strand at 66.291 kb on + strand, within GFF4486 at 66.315 kb on - strand, within GFF4486 at 66.315 kb on - strand, within GFF4486 at 66.363 kb on + strand, within GFF4486 at 66.363 kb on + strand, within GFF4486 at 66.364 kb on - strand, within GFF4486 at 66.493 kb on + strand, within GFF4486 at 66.494 kb on - strand, within GFF4486 at 66.494 kb on - strand, within GFF4486 at 66.696 kb on + strand, within GFF4486 at 66.696 kb on + strand, within GFF4486 at 66.696 kb on + strand, within GFF4486 at 66.843 kb on + strand, within GFF4486 at 66.843 kb on + strand, within GFF4486 at 66.844 kb on - strand, within GFF4486 at 66.877 kb on + strand at 66.877 kb on + strand at 66.878 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 64,802 + -0.3 64,803 - -0.7 64,835 - -0.7 65,084 + GFF4484 0.29 -0.6 65,084 + GFF4484 0.29 +0.6 65,084 + GFF4484 0.29 +0.7 65,085 - GFF4484 0.29 +0.9 65,085 - GFF4484 0.29 -0.7 65,322 + GFF4484 0.58 -0.0 65,323 - GFF4484 0.58 +1.4 65,323 - GFF4484 0.58 -2.3 65,323 - GFF4484 0.58 -0.1 65,403 + GFF4484 0.68 +0.1 65,570 + GFF4484 0.88 -2.9 65,570 + GFF4484 0.88 +1.5 65,807 + GFF4485 0.27 +0.5 65,807 + GFF4485 0.27 -1.3 65,808 - GFF4485 0.27 +0.1 65,808 - GFF4485 0.27 -0.9 66,204 + -0.7 66,204 + +0.1 66,204 + -0.2 66,204 + -0.6 66,205 - -1.3 66,205 - +0.2 66,205 - +0.1 66,205 - -0.2 66,291 + GFF4486 0.15 +0.2 66,315 - GFF4486 0.18 +1.2 66,315 - GFF4486 0.18 +0.6 66,363 + GFF4486 0.25 +0.6 66,363 + GFF4486 0.25 -0.7 66,364 - GFF4486 0.25 +0.4 66,493 + GFF4486 0.42 -0.4 66,494 - GFF4486 0.42 +0.0 66,494 - GFF4486 0.42 -0.0 66,696 + GFF4486 0.70 +1.1 66,696 + GFF4486 0.70 -0.1 66,696 + GFF4486 0.70 +0.2 66,843 + GFF4486 0.90 -0.5 66,843 + GFF4486 0.90 +1.3 66,844 - GFF4486 0.90 -0.5 66,877 + -0.5 66,877 + -0.7 66,878 - +0.3
Or see this region's nucleotide sequence