Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF442 and GFF443 are separated by 92 nucleotides GFF443 and GFF444 overlap by 4 nucleotides GFF444 and GFF445 are separated by 90 nucleotides
GFF442 - hypothetical protein, at 464,836 to 466,338
GFF442
GFF443 - Ethanolamine ammonia-lyase light chain, at 466,431 to 467,207
GFF443
GFF444 - Ethanolamine ammonia-lyase heavy chain, at 467,204 to 468,592
GFF444
GFF445 - Glutamate/aspartate import solute-binding protein, at 468,683 to 469,582
GFF445
Position (kb) 467
468
469 Strain fitness (log2 ratio) -2
-1
0
1
2 at 466.286 kb on + strand at 466.287 kb on - strand at 466.307 kb on + strand at 466.307 kb on + strand at 466.307 kb on + strand at 466.308 kb on - strand at 466.308 kb on - strand at 466.308 kb on - strand at 466.311 kb on + strand at 466.364 kb on + strand at 466.364 kb on + strand at 466.365 kb on - strand at 466.365 kb on - strand at 466.365 kb on - strand at 466.592 kb on + strand, within GFF443 at 466.639 kb on + strand, within GFF443 at 466.640 kb on - strand, within GFF443 at 466.640 kb on - strand, within GFF443 at 466.640 kb on - strand, within GFF443 at 466.640 kb on - strand, within GFF443 at 466.640 kb on - strand, within GFF443 at 466.648 kb on + strand, within GFF443 at 466.648 kb on + strand, within GFF443 at 466.648 kb on + strand, within GFF443 at 466.649 kb on - strand, within GFF443 at 466.972 kb on + strand, within GFF443 at 466.972 kb on + strand, within GFF443 at 466.973 kb on - strand, within GFF443 at 466.973 kb on - strand, within GFF443 at 467.066 kb on + strand, within GFF443 at 467.067 kb on - strand, within GFF443 at 467.226 kb on + strand at 467.226 kb on + strand at 467.349 kb on + strand, within GFF444 at 467.379 kb on + strand, within GFF444 at 467.383 kb on + strand, within GFF444 at 467.390 kb on + strand, within GFF444 at 467.390 kb on + strand, within GFF444 at 467.391 kb on - strand, within GFF444 at 467.421 kb on + strand, within GFF444 at 467.421 kb on + strand, within GFF444 at 467.422 kb on - strand, within GFF444 at 467.422 kb on - strand, within GFF444 at 467.422 kb on - strand, within GFF444 at 467.496 kb on + strand, within GFF444 at 467.496 kb on + strand, within GFF444 at 467.583 kb on + strand, within GFF444 at 467.589 kb on + strand, within GFF444 at 467.589 kb on + strand, within GFF444 at 467.589 kb on + strand, within GFF444 at 467.589 kb on + strand, within GFF444 at 467.656 kb on - strand, within GFF444 at 467.737 kb on - strand, within GFF444 at 468.045 kb on + strand, within GFF444 at 468.045 kb on + strand, within GFF444 at 468.394 kb on - strand, within GFF444 at 468.644 kb on - strand at 468.650 kb on - strand at 468.650 kb on - strand at 468.660 kb on + strand at 468.759 kb on + strand at 468.759 kb on + strand at 468.759 kb on + strand at 468.759 kb on + strand at 468.759 kb on + strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.760 kb on - strand at 468.855 kb on + strand, within GFF445 at 468.855 kb on + strand, within GFF445 at 468.924 kb on + strand, within GFF445 at 468.925 kb on - strand, within GFF445 at 468.925 kb on - strand, within GFF445 at 468.925 kb on - strand, within GFF445 at 468.951 kb on + strand, within GFF445 at 469.284 kb on + strand, within GFF445 at 469.359 kb on + strand, within GFF445 at 469.389 kb on + strand, within GFF445 at 469.395 kb on + strand, within GFF445 at 469.395 kb on + strand, within GFF445 at 469.396 kb on - strand, within GFF445 at 469.396 kb on - strand, within GFF445
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 466,286 + -0.7 466,287 - -0.8 466,307 + -0.4 466,307 + -1.0 466,307 + -1.0 466,308 - -0.3 466,308 - +0.4 466,308 - -0.7 466,311 + -0.8 466,364 + -0.2 466,364 + +0.0 466,365 - +1.1 466,365 - +0.9 466,365 - -0.9 466,592 + GFF443 0.21 +0.3 466,639 + GFF443 0.27 -1.2 466,640 - GFF443 0.27 -0.1 466,640 - GFF443 0.27 +1.1 466,640 - GFF443 0.27 +0.8 466,640 - GFF443 0.27 -1.5 466,640 - GFF443 0.27 +0.0 466,648 + GFF443 0.28 -0.5 466,648 + GFF443 0.28 +0.4 466,648 + GFF443 0.28 -0.6 466,649 - GFF443 0.28 -0.7 466,972 + GFF443 0.70 +0.9 466,972 + GFF443 0.70 +0.6 466,973 - GFF443 0.70 -0.2 466,973 - GFF443 0.70 +0.6 467,066 + GFF443 0.82 -0.3 467,067 - GFF443 0.82 -0.6 467,226 + -1.3 467,226 + +1.9 467,349 + GFF444 0.10 -0.7 467,379 + GFF444 0.13 +0.1 467,383 + GFF444 0.13 +0.4 467,390 + GFF444 0.13 +1.1 467,390 + GFF444 0.13 +0.2 467,391 - GFF444 0.13 -0.5 467,421 + GFF444 0.16 +0.4 467,421 + GFF444 0.16 +0.2 467,422 - GFF444 0.16 +0.3 467,422 - GFF444 0.16 +0.1 467,422 - GFF444 0.16 +0.6 467,496 + GFF444 0.21 -0.0 467,496 + GFF444 0.21 +1.2 467,583 + GFF444 0.27 +0.3 467,589 + GFF444 0.28 -0.1 467,589 + GFF444 0.28 -0.2 467,589 + GFF444 0.28 +0.5 467,589 + GFF444 0.28 +0.3 467,656 - GFF444 0.33 -0.1 467,737 - GFF444 0.38 -0.5 468,045 + GFF444 0.61 +0.6 468,045 + GFF444 0.61 -0.3 468,394 - GFF444 0.86 -0.0 468,644 - -2.3 468,650 - -0.8 468,650 - -0.3 468,660 + +0.1 468,759 + +0.4 468,759 + -0.1 468,759 + -0.0 468,759 + +0.9 468,759 + -0.1 468,760 - -0.4 468,760 - +0.8 468,760 - -0.4 468,760 - +0.8 468,760 - +0.6 468,760 - +0.2 468,760 - +0.8 468,760 - -0.0 468,855 + GFF445 0.19 -0.1 468,855 + GFF445 0.19 -0.4 468,924 + GFF445 0.27 +0.6 468,925 - GFF445 0.27 -0.0 468,925 - GFF445 0.27 -0.7 468,925 - GFF445 0.27 +0.6 468,951 + GFF445 0.30 -0.1 469,284 + GFF445 0.67 +0.2 469,359 + GFF445 0.75 -0.5 469,389 + GFF445 0.78 +0.3 469,395 + GFF445 0.79 -0.6 469,395 + GFF445 0.79 +1.3 469,396 - GFF445 0.79 +0.6 469,396 - GFF445 0.79 -0.0
Or see this region's nucleotide sequence