Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4417 and GFF4418 are separated by 2 nucleotides GFF4418 and GFF4419 are separated by 7 nucleotides
GFF4417 - hypothetical protein, at 224,356 to 226,020
GFF4417
GFF4418 - hypothetical protein, at 226,023 to 226,460
GFF4418
GFF4419 - hypothetical protein, at 226,468 to 226,902
GFF4419
Position (kb) 226
227 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 225.141 kb on - strand, within GFF4417 at 225.437 kb on + strand, within GFF4417 at 225.437 kb on + strand, within GFF4417 at 225.608 kb on + strand, within GFF4417 at 225.608 kb on + strand, within GFF4417 at 225.609 kb on - strand, within GFF4417 at 225.609 kb on - strand, within GFF4417 at 225.609 kb on - strand, within GFF4417 at 225.656 kb on + strand, within GFF4417 at 225.656 kb on + strand, within GFF4417 at 225.656 kb on + strand, within GFF4417 at 225.657 kb on - strand, within GFF4417 at 225.657 kb on - strand, within GFF4417 at 225.657 kb on - strand, within GFF4417 at 225.657 kb on - strand, within GFF4417 at 225.666 kb on + strand, within GFF4417 at 225.881 kb on + strand at 225.882 kb on - strand at 225.938 kb on + strand at 225.939 kb on - strand at 225.972 kb on - strand at 225.972 kb on - strand at 226.097 kb on + strand, within GFF4418 at 226.098 kb on - strand, within GFF4418 at 226.469 kb on + strand at 226.697 kb on + strand, within GFF4419 at 226.757 kb on + strand, within GFF4419 at 226.757 kb on + strand, within GFF4419 at 226.758 kb on - strand, within GFF4419 at 226.758 kb on - strand, within GFF4419 at 226.758 kb on - strand, within GFF4419 at 226.758 kb on - strand, within GFF4419 at 226.758 kb on - strand, within GFF4419 at 226.758 kb on - strand, within GFF4419 at 226.758 kb on - strand, within GFF4419 at 226.919 kb on + strand at 226.919 kb on + strand at 226.919 kb on + strand at 226.920 kb on - strand at 226.920 kb on - strand at 226.920 kb on - strand at 226.920 kb on - strand at 226.929 kb on + strand at 227.289 kb on + strand at 227.290 kb on - strand at 227.321 kb on + strand at 227.401 kb on - strand at 227.401 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 225,141 - GFF4417 0.47 -0.4 225,437 + GFF4417 0.65 -0.8 225,437 + GFF4417 0.65 -0.8 225,608 + GFF4417 0.75 +0.2 225,608 + GFF4417 0.75 +0.4 225,609 - GFF4417 0.75 -0.8 225,609 - GFF4417 0.75 -1.3 225,609 - GFF4417 0.75 -0.2 225,656 + GFF4417 0.78 -1.0 225,656 + GFF4417 0.78 +0.4 225,656 + GFF4417 0.78 +0.2 225,657 - GFF4417 0.78 +1.1 225,657 - GFF4417 0.78 -0.1 225,657 - GFF4417 0.78 +1.0 225,657 - GFF4417 0.78 +0.9 225,666 + GFF4417 0.79 -0.5 225,881 + +0.2 225,882 - -0.2 225,938 + +0.5 225,939 - -0.4 225,972 - +0.3 225,972 - -0.5 226,097 + GFF4418 0.17 -0.8 226,098 - GFF4418 0.17 +0.2 226,469 + +0.2 226,697 + GFF4419 0.53 -0.7 226,757 + GFF4419 0.66 -0.6 226,757 + GFF4419 0.66 -1.8 226,758 - GFF4419 0.67 -0.5 226,758 - GFF4419 0.67 -0.5 226,758 - GFF4419 0.67 -0.2 226,758 - GFF4419 0.67 +0.7 226,758 - GFF4419 0.67 -0.5 226,758 - GFF4419 0.67 -0.3 226,758 - GFF4419 0.67 -0.4 226,919 + +0.9 226,919 + +0.2 226,919 + +2.8 226,920 - +0.1 226,920 - -0.1 226,920 - -0.0 226,920 - +1.3 226,929 + +0.8 227,289 + -0.5 227,290 - +0.4 227,321 + +0.0 227,401 - +0.5 227,401 - +0.1
Or see this region's nucleotide sequence