Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4358 and GFF4359 are separated by 203 nucleotides GFF4359 and GFF4360 are separated by 165 nucleotides
GFF4358 - Protein flp, at 143,236 to 144,441
GFF4358
GFF4359 - hypothetical protein, at 144,645 to 145,922
GFF4359
GFF4360 - hypothetical protein, at 146,088 to 146,702
GFF4360
Position (kb) 144
145
146 Strain fitness (log2 ratio) -1
0
1
2 at 143.701 kb on + strand, within GFF4358 at 143.900 kb on - strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.956 kb on + strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 143.957 kb on - strand, within GFF4358 at 144.066 kb on + strand, within GFF4358 at 144.066 kb on + strand, within GFF4358 at 144.067 kb on - strand, within GFF4358 at 144.067 kb on - strand, within GFF4358 at 144.067 kb on - strand, within GFF4358 at 144.067 kb on - strand, within GFF4358 at 144.229 kb on + strand, within GFF4358 at 144.229 kb on + strand, within GFF4358 at 144.230 kb on - strand, within GFF4358 at 144.368 kb on - strand at 144.368 kb on - strand at 144.418 kb on + strand at 144.585 kb on + strand at 144.585 kb on + strand at 144.585 kb on + strand at 144.586 kb on - strand at 144.586 kb on - strand at 144.702 kb on + strand at 144.702 kb on + strand at 145.149 kb on + strand, within GFF4359 at 145.149 kb on + strand, within GFF4359 at 145.149 kb on + strand, within GFF4359 at 145.149 kb on + strand, within GFF4359 at 145.149 kb on + strand, within GFF4359 at 145.150 kb on - strand, within GFF4359 at 145.171 kb on - strand, within GFF4359 at 145.392 kb on + strand, within GFF4359 at 145.446 kb on + strand, within GFF4359 at 145.690 kb on - strand, within GFF4359 at 145.690 kb on - strand, within GFF4359 at 145.797 kb on + strand at 145.798 kb on - strand at 145.819 kb on - strand at 145.819 kb on - strand at 145.902 kb on + strand at 145.903 kb on - strand at 145.920 kb on + strand at 145.921 kb on - strand at 146.031 kb on + strand at 146.031 kb on + strand at 146.032 kb on - strand at 146.032 kb on - strand at 146.093 kb on + strand at 146.274 kb on + strand, within GFF4360 at 146.289 kb on + strand, within GFF4360 at 146.289 kb on + strand, within GFF4360 at 146.289 kb on + strand, within GFF4360 at 146.290 kb on - strand, within GFF4360 at 146.290 kb on - strand, within GFF4360 at 146.613 kb on + strand, within GFF4360
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 143,701 + GFF4358 0.39 +0.4 143,900 - GFF4358 0.55 -0.4 143,956 + GFF4358 0.60 +0.6 143,956 + GFF4358 0.60 +0.5 143,956 + GFF4358 0.60 -0.0 143,956 + GFF4358 0.60 -0.2 143,956 + GFF4358 0.60 -0.4 143,956 + GFF4358 0.60 +0.5 143,957 - GFF4358 0.60 +0.2 143,957 - GFF4358 0.60 -0.0 143,957 - GFF4358 0.60 -0.5 143,957 - GFF4358 0.60 +0.4 143,957 - GFF4358 0.60 -1.2 143,957 - GFF4358 0.60 -0.4 144,066 + GFF4358 0.69 -0.3 144,066 + GFF4358 0.69 +0.0 144,067 - GFF4358 0.69 +0.1 144,067 - GFF4358 0.69 +1.4 144,067 - GFF4358 0.69 -0.7 144,067 - GFF4358 0.69 -0.9 144,229 + GFF4358 0.82 +0.3 144,229 + GFF4358 0.82 -0.3 144,230 - GFF4358 0.82 -0.5 144,368 - +1.2 144,368 - -0.5 144,418 + -0.1 144,585 + +1.2 144,585 + +0.6 144,585 + -0.3 144,586 - +0.3 144,586 - -0.8 144,702 + -0.5 144,702 + -0.5 145,149 + GFF4359 0.39 -0.7 145,149 + GFF4359 0.39 -0.0 145,149 + GFF4359 0.39 -0.6 145,149 + GFF4359 0.39 -0.4 145,149 + GFF4359 0.39 +0.6 145,150 - GFF4359 0.40 +0.4 145,171 - GFF4359 0.41 -0.6 145,392 + GFF4359 0.58 +0.8 145,446 + GFF4359 0.63 +1.8 145,690 - GFF4359 0.82 +1.2 145,690 - GFF4359 0.82 +0.7 145,797 + -0.6 145,798 - +0.8 145,819 - -0.4 145,819 - +0.2 145,902 + -1.6 145,903 - -0.1 145,920 + -0.5 145,921 - +0.0 146,031 + -1.0 146,031 + +1.0 146,032 - +0.6 146,032 - +0.2 146,093 + +0.6 146,274 + GFF4360 0.30 +0.7 146,289 + GFF4360 0.33 -0.7 146,289 + GFF4360 0.33 -0.2 146,289 + GFF4360 0.33 -0.0 146,290 - GFF4360 0.33 +0.8 146,290 - GFF4360 0.33 +0.6 146,613 + GFF4360 0.85 -0.2
Or see this region's nucleotide sequence