Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4292 and GFF4293 are separated by 83 nucleotides GFF4293 and GFF4294 are separated by 31 nucleotides
GFF4292 - hypothetical protein, at 72,236 to 73,204
GFF4292
GFF4293 - hypothetical protein, at 73,288 to 74,481
GFF4293
GFF4294 - hypothetical protein, at 74,513 to 75,925
GFF4294
Position (kb) 73
74
75 Strain fitness (log2 ratio) -2
-1
0
1
2 at 72.346 kb on + strand, within GFF4292 at 72.347 kb on - strand, within GFF4292 at 72.347 kb on - strand, within GFF4292 at 72.347 kb on - strand, within GFF4292 at 72.549 kb on + strand, within GFF4292 at 72.627 kb on + strand, within GFF4292 at 72.627 kb on + strand, within GFF4292 at 72.736 kb on - strand, within GFF4292 at 72.748 kb on - strand, within GFF4292 at 72.876 kb on + strand, within GFF4292 at 72.877 kb on - strand, within GFF4292 at 73.289 kb on + strand at 73.290 kb on - strand at 73.490 kb on + strand, within GFF4293 at 73.491 kb on - strand, within GFF4293 at 73.491 kb on - strand, within GFF4293 at 73.646 kb on + strand, within GFF4293 at 73.680 kb on - strand, within GFF4293 at 73.699 kb on - strand, within GFF4293 at 73.700 kb on + strand, within GFF4293 at 73.700 kb on + strand, within GFF4293 at 73.701 kb on - strand, within GFF4293 at 73.791 kb on + strand, within GFF4293 at 73.935 kb on - strand, within GFF4293 at 73.935 kb on - strand, within GFF4293 at 73.935 kb on - strand, within GFF4293 at 73.946 kb on + strand, within GFF4293 at 73.946 kb on + strand, within GFF4293 at 73.946 kb on + strand, within GFF4293 at 73.947 kb on - strand, within GFF4293 at 74.042 kb on + strand, within GFF4293 at 74.042 kb on + strand, within GFF4293 at 74.043 kb on - strand, within GFF4293 at 74.570 kb on - strand at 74.570 kb on - strand at 74.685 kb on + strand, within GFF4294 at 74.754 kb on + strand, within GFF4294 at 74.754 kb on + strand, within GFF4294 at 74.754 kb on + strand, within GFF4294 at 74.754 kb on + strand, within GFF4294 at 74.755 kb on - strand, within GFF4294 at 74.755 kb on - strand, within GFF4294 at 74.755 kb on - strand, within GFF4294 at 74.755 kb on - strand, within GFF4294 at 74.755 kb on - strand, within GFF4294 at 74.929 kb on - strand, within GFF4294 at 74.929 kb on - strand, within GFF4294 at 74.929 kb on - strand, within GFF4294 at 75.093 kb on + strand, within GFF4294 at 75.094 kb on - strand, within GFF4294 at 75.171 kb on + strand, within GFF4294 at 75.172 kb on - strand, within GFF4294 at 75.202 kb on - strand, within GFF4294
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 72,346 + GFF4292 0.11 -0.6 72,347 - GFF4292 0.11 -1.0 72,347 - GFF4292 0.11 -0.3 72,347 - GFF4292 0.11 +0.5 72,549 + GFF4292 0.32 +0.5 72,627 + GFF4292 0.40 +0.5 72,627 + GFF4292 0.40 -0.7 72,736 - GFF4292 0.52 -0.8 72,748 - GFF4292 0.53 -1.2 72,876 + GFF4292 0.66 +0.3 72,877 - GFF4292 0.66 -0.1 73,289 + -0.5 73,290 - +2.2 73,490 + GFF4293 0.17 +0.1 73,491 - GFF4293 0.17 +0.1 73,491 - GFF4293 0.17 +0.3 73,646 + GFF4293 0.30 +0.0 73,680 - GFF4293 0.33 +0.1 73,699 - GFF4293 0.34 -0.4 73,700 + GFF4293 0.35 -1.1 73,700 + GFF4293 0.35 -2.5 73,701 - GFF4293 0.35 -1.0 73,791 + GFF4293 0.42 +0.2 73,935 - GFF4293 0.54 -0.1 73,935 - GFF4293 0.54 +0.1 73,935 - GFF4293 0.54 +1.6 73,946 + GFF4293 0.55 -0.5 73,946 + GFF4293 0.55 +0.4 73,946 + GFF4293 0.55 +0.2 73,947 - GFF4293 0.55 -0.5 74,042 + GFF4293 0.63 -2.2 74,042 + GFF4293 0.63 +1.4 74,043 - GFF4293 0.63 -0.5 74,570 - +0.1 74,570 - +0.2 74,685 + GFF4294 0.12 -0.6 74,754 + GFF4294 0.17 +0.2 74,754 + GFF4294 0.17 -0.7 74,754 + GFF4294 0.17 -1.3 74,754 + GFF4294 0.17 -0.8 74,755 - GFF4294 0.17 -0.2 74,755 - GFF4294 0.17 +0.3 74,755 - GFF4294 0.17 -0.6 74,755 - GFF4294 0.17 +0.8 74,755 - GFF4294 0.17 +1.2 74,929 - GFF4294 0.29 -0.0 74,929 - GFF4294 0.29 -2.3 74,929 - GFF4294 0.29 -0.4 75,093 + GFF4294 0.41 -0.0 75,094 - GFF4294 0.41 +1.0 75,171 + GFF4294 0.47 +0.6 75,172 - GFF4294 0.47 -0.2 75,202 - GFF4294 0.49 -1.2
Or see this region's nucleotide sequence