Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4277 and GFF4278 are separated by 72 nucleotides GFF4278 and GFF4279 are separated by 10 nucleotides
GFF4277 - hypothetical protein, at 47,079 to 48,191
GFF4277
GFF4278 - hypothetical protein, at 48,264 to 50,978
GFF4278
GFF4279 - hypothetical protein, at 50,989 to 52,080
GFF4279
Position (kb) 48
49
50
51 Strain fitness (log2 ratio) -2
-1
0
1 at 47.577 kb on + strand, within GFF4277 at 47.577 kb on + strand, within GFF4277 at 47.577 kb on + strand, within GFF4277 at 47.577 kb on + strand, within GFF4277 at 47.578 kb on - strand, within GFF4277 at 47.578 kb on - strand, within GFF4277 at 47.578 kb on - strand, within GFF4277 at 47.578 kb on - strand, within GFF4277 at 47.578 kb on - strand, within GFF4277 at 47.787 kb on + strand, within GFF4277 at 47.787 kb on + strand, within GFF4277 at 48.081 kb on - strand at 48.081 kb on - strand at 48.151 kb on - strand at 48.732 kb on + strand, within GFF4278 at 48.732 kb on + strand, within GFF4278 at 48.733 kb on - strand, within GFF4278 at 49.774 kb on - strand, within GFF4278 at 50.016 kb on - strand, within GFF4278 at 50.109 kb on + strand, within GFF4278 at 50.109 kb on + strand, within GFF4278 at 50.110 kb on - strand, within GFF4278 at 50.110 kb on - strand, within GFF4278 at 50.241 kb on + strand, within GFF4278 at 50.241 kb on + strand, within GFF4278 at 51.218 kb on + strand, within GFF4279 at 51.218 kb on + strand, within GFF4279 at 51.219 kb on - strand, within GFF4279 at 51.750 kb on - strand, within GFF4279 at 51.750 kb on - strand, within GFF4279
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 47,577 + GFF4277 0.45 -0.2 47,577 + GFF4277 0.45 -2.5 47,577 + GFF4277 0.45 +0.0 47,577 + GFF4277 0.45 -0.6 47,578 - GFF4277 0.45 +0.2 47,578 - GFF4277 0.45 -0.4 47,578 - GFF4277 0.45 +0.2 47,578 - GFF4277 0.45 +0.1 47,578 - GFF4277 0.45 -0.5 47,787 + GFF4277 0.64 -1.0 47,787 + GFF4277 0.64 -0.5 48,081 - +0.6 48,081 - -0.7 48,151 - +0.9 48,732 + GFF4278 0.17 -0.1 48,732 + GFF4278 0.17 +0.4 48,733 - GFF4278 0.17 -0.3 49,774 - GFF4278 0.56 -0.1 50,016 - GFF4278 0.65 -0.1 50,109 + GFF4278 0.68 -0.0 50,109 + GFF4278 0.68 +0.2 50,110 - GFF4278 0.68 -0.3 50,110 - GFF4278 0.68 +0.8 50,241 + GFF4278 0.73 -0.3 50,241 + GFF4278 0.73 +0.5 51,218 + GFF4279 0.21 -0.3 51,218 + GFF4279 0.21 +1.1 51,219 - GFF4279 0.21 +0.2 51,750 - GFF4279 0.70 +0.7 51,750 - GFF4279 0.70 -0.2
Or see this region's nucleotide sequence