Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4264 and GFF4265 are separated by 41 nucleotides GFF4265 and GFF4266 are separated by 3 nucleotides GFF4266 and GFF4267 are separated by 17 nucleotides
GFF4264 - Phosphoglycolate phosphatase, at 33,525 to 34,268
GFF4264
GFF4265 - hypothetical protein, at 34,310 to 35,089
GFF4265
GFF4266 - SOS response-associated protein YedK, at 35,093 to 35,815
GFF4266
GFF4267 - Hydroxyacylglutathione hydrolase, at 35,833 to 36,747
GFF4267
Position (kb) 35
36 Strain fitness (log2 ratio) -1
0
1
2 at 34.267 kb on - strand at 34.329 kb on - strand at 34.756 kb on + strand, within GFF4265 at 34.757 kb on - strand, within GFF4265 at 34.853 kb on - strand, within GFF4265 at 34.956 kb on + strand, within GFF4265 at 34.956 kb on + strand, within GFF4265 at 34.957 kb on - strand, within GFF4265 at 35.007 kb on - strand, within GFF4265 at 35.198 kb on - strand, within GFF4266 at 35.232 kb on + strand, within GFF4266 at 35.308 kb on + strand, within GFF4266 at 35.309 kb on - strand, within GFF4266 at 35.309 kb on - strand, within GFF4266 at 35.490 kb on + strand, within GFF4266 at 35.490 kb on + strand, within GFF4266 at 35.715 kb on + strand, within GFF4266 at 35.969 kb on + strand, within GFF4267 at 35.969 kb on + strand, within GFF4267 at 35.969 kb on + strand, within GFF4267 at 35.969 kb on + strand, within GFF4267 at 35.970 kb on - strand, within GFF4267 at 35.970 kb on - strand, within GFF4267 at 35.970 kb on - strand, within GFF4267 at 35.970 kb on - strand, within GFF4267 at 35.970 kb on - strand, within GFF4267 at 36.059 kb on + strand, within GFF4267 at 36.059 kb on + strand, within GFF4267 at 36.060 kb on - strand, within GFF4267 at 36.113 kb on + strand, within GFF4267 at 36.113 kb on + strand, within GFF4267 at 36.114 kb on - strand, within GFF4267 at 36.158 kb on + strand, within GFF4267 at 36.159 kb on - strand, within GFF4267 at 36.159 kb on - strand, within GFF4267 at 36.600 kb on + strand, within GFF4267 at 36.601 kb on - strand, within GFF4267 at 36.606 kb on + strand, within GFF4267 at 36.618 kb on - strand, within GFF4267 at 36.760 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 34,267 - -0.4 34,329 - -0.0 34,756 + GFF4265 0.57 +0.7 34,757 - GFF4265 0.57 +0.9 34,853 - GFF4265 0.70 +0.6 34,956 + GFF4265 0.83 +0.4 34,956 + GFF4265 0.83 +0.6 34,957 - GFF4265 0.83 +0.7 35,007 - GFF4265 0.89 +0.5 35,198 - GFF4266 0.15 +0.5 35,232 + GFF4266 0.19 -1.0 35,308 + GFF4266 0.30 +0.6 35,309 - GFF4266 0.30 -1.1 35,309 - GFF4266 0.30 -0.4 35,490 + GFF4266 0.55 +0.5 35,490 + GFF4266 0.55 +1.2 35,715 + GFF4266 0.86 +1.4 35,969 + GFF4267 0.15 +0.9 35,969 + GFF4267 0.15 +0.9 35,969 + GFF4267 0.15 +1.1 35,969 + GFF4267 0.15 +0.9 35,970 - GFF4267 0.15 +1.4 35,970 - GFF4267 0.15 +0.7 35,970 - GFF4267 0.15 +1.9 35,970 - GFF4267 0.15 +0.9 35,970 - GFF4267 0.15 +1.2 36,059 + GFF4267 0.25 +1.1 36,059 + GFF4267 0.25 +0.6 36,060 - GFF4267 0.25 +0.8 36,113 + GFF4267 0.31 +1.4 36,113 + GFF4267 0.31 -0.4 36,114 - GFF4267 0.31 +1.1 36,158 + GFF4267 0.36 +0.6 36,159 - GFF4267 0.36 +1.2 36,159 - GFF4267 0.36 +0.4 36,600 + GFF4267 0.84 +0.4 36,601 - GFF4267 0.84 +1.2 36,606 + GFF4267 0.84 +1.0 36,618 - GFF4267 0.86 +0.7 36,760 - +0.8
Or see this region's nucleotide sequence