Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3691 and GFF3692 are separated by 94 nucleotides GFF3692 and GFF3693 are separated by 49 nucleotides
GFF3691 - putative FAD-linked oxidoreductase, at 32,328 to 33,836
GFF3691
GFF3692 - hypothetical protein, at 33,931 to 35,142
GFF3692
GFF3693 - Lactate utilization protein A, at 35,192 to 36,511
GFF3693
Position (kb) 33
34
35
36 Strain fitness (log2 ratio) -1
0
1 at 33.183 kb on + strand, within GFF3691 at 33.465 kb on + strand, within GFF3691 at 33.465 kb on + strand, within GFF3691 at 33.466 kb on - strand, within GFF3691 at 33.528 kb on + strand, within GFF3691 at 33.528 kb on + strand, within GFF3691 at 33.834 kb on + strand at 33.834 kb on + strand at 33.835 kb on - strand at 33.862 kb on + strand at 34.206 kb on + strand, within GFF3692 at 34.891 kb on + strand, within GFF3692 at 34.892 kb on - strand, within GFF3692 at 35.087 kb on - strand at 35.303 kb on + strand at 35.303 kb on + strand at 35.303 kb on + strand at 35.348 kb on + strand, within GFF3693 at 35.348 kb on + strand, within GFF3693 at 35.348 kb on + strand, within GFF3693 at 35.348 kb on + strand, within GFF3693 at 35.349 kb on - strand, within GFF3693 at 35.349 kb on - strand, within GFF3693 at 35.349 kb on - strand, within GFF3693 at 35.349 kb on - strand, within GFF3693 at 35.409 kb on + strand, within GFF3693 at 35.465 kb on + strand, within GFF3693 at 35.465 kb on + strand, within GFF3693 at 35.465 kb on + strand, within GFF3693 at 36.023 kb on + strand, within GFF3693 at 36.023 kb on + strand, within GFF3693 at 36.024 kb on - strand, within GFF3693 at 36.029 kb on + strand, within GFF3693 at 36.029 kb on + strand, within GFF3693 at 36.029 kb on + strand, within GFF3693 at 36.029 kb on + strand, within GFF3693 at 36.030 kb on - strand, within GFF3693 at 36.030 kb on - strand, within GFF3693 at 36.030 kb on - strand, within GFF3693 at 36.053 kb on + strand, within GFF3693
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 33,183 + GFF3691 0.57 -0.5 33,465 + GFF3691 0.75 +0.3 33,465 + GFF3691 0.75 +0.8 33,466 - GFF3691 0.75 +0.4 33,528 + GFF3691 0.80 -0.1 33,528 + GFF3691 0.80 -0.1 33,834 + -0.8 33,834 + +0.4 33,835 - +0.3 33,862 + +0.7 34,206 + GFF3692 0.23 -0.1 34,891 + GFF3692 0.79 -0.0 34,892 - GFF3692 0.79 +1.6 35,087 - -0.9 35,303 + -1.5 35,303 + +0.3 35,303 + +0.2 35,348 + GFF3693 0.12 +1.6 35,348 + GFF3693 0.12 -0.5 35,348 + GFF3693 0.12 -0.4 35,348 + GFF3693 0.12 +0.1 35,349 - GFF3693 0.12 -0.4 35,349 - GFF3693 0.12 +0.5 35,349 - GFF3693 0.12 -1.1 35,349 - GFF3693 0.12 +0.5 35,409 + GFF3693 0.16 -0.4 35,465 + GFF3693 0.21 +0.3 35,465 + GFF3693 0.21 +0.4 35,465 + GFF3693 0.21 +0.3 36,023 + GFF3693 0.63 -0.1 36,023 + GFF3693 0.63 +0.0 36,024 - GFF3693 0.63 -0.0 36,029 + GFF3693 0.63 -0.1 36,029 + GFF3693 0.63 +0.5 36,029 + GFF3693 0.63 +0.2 36,029 + GFF3693 0.63 +0.1 36,030 - GFF3693 0.63 +0.5 36,030 - GFF3693 0.63 +1.3 36,030 - GFF3693 0.63 -1.5 36,053 + GFF3693 0.65 +0.9
Or see this region's nucleotide sequence