Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3623 and GFF3624 overlap by 4 nucleotides GFF3624 and GFF3625 are separated by 30 nucleotides GFF3625 and GFF3626 are separated by 43 nucleotides
GFF3623 - Fe(3+) dicitrate transport system permease protein FecD, at 489,335 to 490,330
GFF3623
GFF3624 - Hemin import ATP-binding protein HmuV, at 490,327 to 490,644
GFF3624
GFF3625 - Fe(3+) dicitrate transport ATP-binding protein FecE, at 490,675 to 491,067
GFF3625
GFF3626 - hypothetical protein, at 491,111 to 491,827
GFF3626
Position (kb) 490
491 Strain fitness (log2 ratio) -1
0
1 at 489.331 kb on + strand at 489.332 kb on - strand at 489.352 kb on + strand at 489.353 kb on - strand at 489.417 kb on - strand at 489.417 kb on - strand at 489.454 kb on - strand, within GFF3623 at 489.454 kb on - strand, within GFF3623 at 489.475 kb on - strand, within GFF3623 at 489.543 kb on + strand, within GFF3623 at 489.543 kb on + strand, within GFF3623 at 489.544 kb on - strand, within GFF3623 at 489.650 kb on + strand, within GFF3623 at 489.650 kb on + strand, within GFF3623 at 489.650 kb on + strand, within GFF3623 at 489.651 kb on - strand, within GFF3623 at 489.651 kb on - strand, within GFF3623 at 489.651 kb on - strand, within GFF3623 at 489.651 kb on - strand, within GFF3623 at 489.651 kb on - strand, within GFF3623 at 489.651 kb on - strand, within GFF3623 at 489.691 kb on - strand, within GFF3623 at 489.845 kb on + strand, within GFF3623 at 489.845 kb on + strand, within GFF3623 at 489.845 kb on + strand, within GFF3623 at 489.846 kb on - strand, within GFF3623 at 489.846 kb on - strand, within GFF3623 at 489.882 kb on + strand, within GFF3623 at 489.882 kb on + strand, within GFF3623 at 489.883 kb on - strand, within GFF3623 at 489.883 kb on - strand, within GFF3623 at 489.936 kb on + strand, within GFF3623 at 489.936 kb on + strand, within GFF3623 at 489.936 kb on + strand, within GFF3623 at 489.936 kb on + strand, within GFF3623 at 489.937 kb on - strand, within GFF3623 at 489.937 kb on - strand, within GFF3623 at 489.937 kb on - strand, within GFF3623 at 489.937 kb on - strand, within GFF3623 at 490.113 kb on + strand, within GFF3623 at 490.113 kb on + strand, within GFF3623 at 490.113 kb on + strand, within GFF3623 at 490.114 kb on - strand, within GFF3623 at 490.114 kb on - strand, within GFF3623 at 490.507 kb on + strand, within GFF3624 at 490.564 kb on + strand, within GFF3624 at 490.564 kb on + strand, within GFF3624 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.719 kb on + strand, within GFF3625 at 490.720 kb on - strand, within GFF3625 at 490.957 kb on - strand, within GFF3625 at 491.146 kb on + strand at 491.260 kb on - strand, within GFF3626 at 491.318 kb on + strand, within GFF3626 at 491.318 kb on + strand, within GFF3626 at 491.417 kb on + strand, within GFF3626 at 491.511 kb on + strand, within GFF3626 at 491.511 kb on + strand, within GFF3626 at 491.511 kb on + strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626 at 491.512 kb on - strand, within GFF3626
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 489,331 + -0.2 489,332 - -1.1 489,352 + +0.3 489,353 - -0.5 489,417 - -1.1 489,417 - +0.2 489,454 - GFF3623 0.12 -0.4 489,454 - GFF3623 0.12 +0.6 489,475 - GFF3623 0.14 +0.8 489,543 + GFF3623 0.21 -0.4 489,543 + GFF3623 0.21 +0.8 489,544 - GFF3623 0.21 +0.1 489,650 + GFF3623 0.32 +0.6 489,650 + GFF3623 0.32 +1.6 489,650 + GFF3623 0.32 -0.7 489,651 - GFF3623 0.32 -0.1 489,651 - GFF3623 0.32 -1.3 489,651 - GFF3623 0.32 -0.2 489,651 - GFF3623 0.32 -0.2 489,651 - GFF3623 0.32 -0.4 489,651 - GFF3623 0.32 +0.1 489,691 - GFF3623 0.36 -0.5 489,845 + GFF3623 0.51 +0.3 489,845 + GFF3623 0.51 -0.0 489,845 + GFF3623 0.51 -0.8 489,846 - GFF3623 0.51 -0.3 489,846 - GFF3623 0.51 +0.6 489,882 + GFF3623 0.55 -0.0 489,882 + GFF3623 0.55 -0.9 489,883 - GFF3623 0.55 +0.4 489,883 - GFF3623 0.55 -0.4 489,936 + GFF3623 0.60 +0.4 489,936 + GFF3623 0.60 -0.0 489,936 + GFF3623 0.60 +0.5 489,936 + GFF3623 0.60 -0.8 489,937 - GFF3623 0.60 -0.8 489,937 - GFF3623 0.60 -0.6 489,937 - GFF3623 0.60 +0.7 489,937 - GFF3623 0.60 -0.3 490,113 + GFF3623 0.78 +0.6 490,113 + GFF3623 0.78 +1.0 490,113 + GFF3623 0.78 +0.9 490,114 - GFF3623 0.78 +0.3 490,114 - GFF3623 0.78 -0.3 490,507 + GFF3624 0.57 -0.1 490,564 + GFF3624 0.75 -0.4 490,564 + GFF3624 0.75 +0.1 490,719 + GFF3625 0.11 -1.3 490,719 + GFF3625 0.11 -0.7 490,719 + GFF3625 0.11 +1.5 490,719 + GFF3625 0.11 +0.3 490,719 + GFF3625 0.11 +0.0 490,719 + GFF3625 0.11 +0.5 490,719 + GFF3625 0.11 +0.3 490,720 - GFF3625 0.11 -0.3 490,957 - GFF3625 0.72 +0.4 491,146 + -0.2 491,260 - GFF3626 0.21 +0.3 491,318 + GFF3626 0.29 -0.2 491,318 + GFF3626 0.29 -0.2 491,417 + GFF3626 0.43 -0.3 491,511 + GFF3626 0.56 -1.1 491,511 + GFF3626 0.56 +0.5 491,511 + GFF3626 0.56 -0.6 491,512 - GFF3626 0.56 +0.1 491,512 - GFF3626 0.56 +0.2 491,512 - GFF3626 0.56 -0.2 491,512 - GFF3626 0.56 -1.0 491,512 - GFF3626 0.56 -0.3 491,512 - GFF3626 0.56 +0.4 491,512 - GFF3626 0.56 -0.0
Or see this region's nucleotide sequence