Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3571 and GFF3572 are separated by 63 nucleotides GFF3572 and GFF3573 are separated by 9 nucleotides GFF3573 and GFF3574 overlap by 4 nucleotides
GFF3571 - putative FAD-linked oxidoreductase, at 430,668 to 432,080
GFF3571
GFF3572 - hypothetical protein, at 432,144 to 436,118
GFF3572
GFF3573 - Dihydrofolate reductase type 3, at 436,128 to 436,649
GFF3573
GFF3574 - hypothetical protein, at 436,646 to 437,911
GFF3574
Position (kb) 432
433
434
435
436
437 Strain fitness (log2 ratio) -1
0
1 at 431.283 kb on + strand, within GFF3571 at 431.284 kb on - strand, within GFF3571 at 431.284 kb on - strand, within GFF3571 at 431.337 kb on + strand, within GFF3571 at 431.448 kb on + strand, within GFF3571 at 431.670 kb on + strand, within GFF3571 at 431.671 kb on - strand, within GFF3571 at 431.889 kb on + strand, within GFF3571 at 431.930 kb on + strand, within GFF3571 at 431.930 kb on + strand, within GFF3571 at 431.931 kb on - strand, within GFF3571 at 431.973 kb on + strand at 432.097 kb on + strand at 432.115 kb on + strand at 432.178 kb on + strand at 432.190 kb on + strand at 432.190 kb on + strand at 432.454 kb on + strand at 432.455 kb on - strand at 432.780 kb on + strand, within GFF3572 at 432.781 kb on - strand, within GFF3572 at 432.781 kb on - strand, within GFF3572 at 433.428 kb on + strand, within GFF3572 at 433.428 kb on + strand, within GFF3572 at 433.428 kb on + strand, within GFF3572 at 434.541 kb on - strand, within GFF3572 at 434.704 kb on - strand, within GFF3572 at 434.704 kb on - strand, within GFF3572 at 434.704 kb on - strand, within GFF3572 at 434.704 kb on - strand, within GFF3572 at 436.703 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 431,283 + GFF3571 0.44 -0.2 431,284 - GFF3571 0.44 +0.4 431,284 - GFF3571 0.44 -0.2 431,337 + GFF3571 0.47 +0.0 431,448 + GFF3571 0.55 -0.2 431,670 + GFF3571 0.71 -0.3 431,671 - GFF3571 0.71 -0.7 431,889 + GFF3571 0.86 -0.2 431,930 + GFF3571 0.89 +0.7 431,930 + GFF3571 0.89 +0.0 431,931 - GFF3571 0.89 +0.4 431,973 + -0.3 432,097 + -0.2 432,115 + -0.4 432,178 + -0.7 432,190 + -0.4 432,190 + +0.2 432,454 + -0.6 432,455 - +0.2 432,780 + GFF3572 0.16 -0.3 432,781 - GFF3572 0.16 +1.2 432,781 - GFF3572 0.16 -0.2 433,428 + GFF3572 0.32 +0.2 433,428 + GFF3572 0.32 +0.3 433,428 + GFF3572 0.32 +0.6 434,541 - GFF3572 0.60 +0.0 434,704 - GFF3572 0.64 -0.0 434,704 - GFF3572 0.64 +0.0 434,704 - GFF3572 0.64 -0.4 434,704 - GFF3572 0.64 -0.2 436,703 - -1.3
Or see this region's nucleotide sequence