Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3469 and GFF3470 are separated by 24 nucleotides GFF3470 and GFF3471 overlap by 4 nucleotides
GFF3469 - hypothetical protein, at 322,199 to 323,473
GFF3469
GFF3470 - Multicopper oxidase MmcO, at 323,498 to 324,970
GFF3470
GFF3471 - hypothetical protein, at 324,967 to 326,220
GFF3471
Position (kb) 323
324
325 Strain fitness (log2 ratio) -2
-1
0
1 at 322.586 kb on + strand, within GFF3469 at 322.790 kb on + strand, within GFF3469 at 322.792 kb on + strand, within GFF3469 at 322.793 kb on - strand, within GFF3469 at 322.799 kb on + strand, within GFF3469 at 322.799 kb on + strand, within GFF3469 at 322.800 kb on - strand, within GFF3469 at 322.847 kb on + strand, within GFF3469 at 322.847 kb on + strand, within GFF3469 at 323.097 kb on - strand, within GFF3469 at 323.097 kb on - strand, within GFF3469 at 323.100 kb on - strand, within GFF3469 at 323.100 kb on - strand, within GFF3469 at 323.100 kb on - strand, within GFF3469 at 323.130 kb on - strand, within GFF3469 at 323.699 kb on + strand, within GFF3470 at 323.699 kb on + strand, within GFF3470 at 323.699 kb on + strand, within GFF3470 at 323.704 kb on - strand, within GFF3470 at 323.816 kb on + strand, within GFF3470 at 323.816 kb on + strand, within GFF3470 at 323.817 kb on - strand, within GFF3470 at 323.879 kb on + strand, within GFF3470 at 323.879 kb on + strand, within GFF3470 at 323.879 kb on + strand, within GFF3470 at 323.880 kb on - strand, within GFF3470 at 323.909 kb on + strand, within GFF3470 at 323.909 kb on + strand, within GFF3470 at 323.910 kb on - strand, within GFF3470 at 324.386 kb on + strand, within GFF3470 at 324.386 kb on + strand, within GFF3470 at 324.449 kb on - strand, within GFF3470 at 324.449 kb on - strand, within GFF3470 at 324.449 kb on - strand, within GFF3470 at 324.530 kb on + strand, within GFF3470 at 324.531 kb on - strand, within GFF3470 at 324.531 kb on - strand, within GFF3470 at 324.725 kb on + strand, within GFF3470 at 324.726 kb on - strand, within GFF3470 at 324.726 kb on - strand, within GFF3470 at 324.726 kb on - strand, within GFF3470 at 324.831 kb on - strand at 324.842 kb on - strand at 325.267 kb on + strand, within GFF3471 at 325.268 kb on - strand, within GFF3471 at 325.335 kb on + strand, within GFF3471 at 325.390 kb on + strand, within GFF3471 at 325.804 kb on + strand, within GFF3471 at 325.805 kb on - strand, within GFF3471 at 325.805 kb on - strand, within GFF3471 at 325.949 kb on - strand, within GFF3471
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 322,586 + GFF3469 0.30 -0.1 322,790 + GFF3469 0.46 -0.2 322,792 + GFF3469 0.47 -0.8 322,793 - GFF3469 0.47 -1.2 322,799 + GFF3469 0.47 +0.0 322,799 + GFF3469 0.47 +0.2 322,800 - GFF3469 0.47 +0.8 322,847 + GFF3469 0.51 +0.3 322,847 + GFF3469 0.51 -0.7 323,097 - GFF3469 0.70 +0.2 323,097 - GFF3469 0.70 +0.6 323,100 - GFF3469 0.71 -1.2 323,100 - GFF3469 0.71 -1.8 323,100 - GFF3469 0.71 +0.4 323,130 - GFF3469 0.73 -2.1 323,699 + GFF3470 0.14 -0.0 323,699 + GFF3470 0.14 -0.1 323,699 + GFF3470 0.14 -0.2 323,704 - GFF3470 0.14 +0.1 323,816 + GFF3470 0.22 -0.3 323,816 + GFF3470 0.22 -0.4 323,817 - GFF3470 0.22 +0.1 323,879 + GFF3470 0.26 +0.2 323,879 + GFF3470 0.26 +0.2 323,879 + GFF3470 0.26 +0.7 323,880 - GFF3470 0.26 -0.1 323,909 + GFF3470 0.28 -0.2 323,909 + GFF3470 0.28 -1.0 323,910 - GFF3470 0.28 +0.3 324,386 + GFF3470 0.60 -0.2 324,386 + GFF3470 0.60 +0.6 324,449 - GFF3470 0.65 -0.8 324,449 - GFF3470 0.65 -0.1 324,449 - GFF3470 0.65 +0.8 324,530 + GFF3470 0.70 +0.2 324,531 - GFF3470 0.70 -0.0 324,531 - GFF3470 0.70 +0.1 324,725 + GFF3470 0.83 +0.6 324,726 - GFF3470 0.83 -0.4 324,726 - GFF3470 0.83 +0.5 324,726 - GFF3470 0.83 -1.5 324,831 - +1.2 324,842 - -0.9 325,267 + GFF3471 0.24 -1.3 325,268 - GFF3471 0.24 -0.8 325,335 + GFF3471 0.29 +0.1 325,390 + GFF3471 0.34 +0.1 325,804 + GFF3471 0.67 -1.1 325,805 - GFF3471 0.67 +0.4 325,805 - GFF3471 0.67 -0.1 325,949 - GFF3471 0.78 -0.8
Or see this region's nucleotide sequence