Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3238 and GFF3239 are separated by 301 nucleotides GFF3239 and GFF3240 are separated by 79 nucleotides
GFF3238 - hypothetical protein, at 65,613 to 66,083
GFF3238
GFF3239 - hypothetical protein, at 66,385 to 67,074
GFF3239
GFF3240 - Carbamoyl-phosphate synthase small chain, at 67,154 to 68,359
GFF3240
Position (kb) 66
67
68 Strain fitness (log2 ratio) -1
0
1 at 65.435 kb on + strand at 65.435 kb on + strand at 65.436 kb on - strand at 65.436 kb on - strand at 65.545 kb on + strand at 65.687 kb on + strand, within GFF3238 at 65.692 kb on + strand, within GFF3238 at 65.693 kb on - strand, within GFF3238 at 65.693 kb on - strand, within GFF3238 at 65.737 kb on + strand, within GFF3238 at 65.737 kb on + strand, within GFF3238 at 65.857 kb on - strand, within GFF3238 at 65.857 kb on - strand, within GFF3238 at 66.196 kb on + strand at 66.317 kb on - strand at 66.391 kb on + strand at 66.391 kb on + strand at 66.392 kb on - strand at 66.449 kb on - strand at 66.449 kb on - strand at 66.449 kb on - strand at 66.449 kb on - strand at 66.487 kb on + strand, within GFF3239 at 66.487 kb on + strand, within GFF3239 at 66.488 kb on - strand, within GFF3239 at 66.488 kb on - strand, within GFF3239 at 66.488 kb on - strand, within GFF3239 at 66.666 kb on + strand, within GFF3239 at 66.666 kb on + strand, within GFF3239 at 66.800 kb on - strand, within GFF3239 at 66.964 kb on - strand, within GFF3239 at 66.964 kb on - strand, within GFF3239 at 66.964 kb on - strand, within GFF3239 at 67.023 kb on + strand at 67.072 kb on + strand at 67.073 kb on - strand at 67.073 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 65,435 + +1.4 65,435 + +0.5 65,436 - -0.5 65,436 - -0.5 65,545 + -0.0 65,687 + GFF3238 0.16 +0.6 65,692 + GFF3238 0.17 +0.7 65,693 - GFF3238 0.17 -0.3 65,693 - GFF3238 0.17 +0.8 65,737 + GFF3238 0.26 +0.5 65,737 + GFF3238 0.26 -0.3 65,857 - GFF3238 0.52 +0.4 65,857 - GFF3238 0.52 -0.1 66,196 + +0.6 66,317 - +0.6 66,391 + -0.4 66,391 + +0.4 66,392 - -0.2 66,449 - -0.2 66,449 - +0.2 66,449 - +0.2 66,449 - +0.1 66,487 + GFF3239 0.15 +0.5 66,487 + GFF3239 0.15 -0.7 66,488 - GFF3239 0.15 -0.0 66,488 - GFF3239 0.15 +0.2 66,488 - GFF3239 0.15 -0.9 66,666 + GFF3239 0.41 -0.1 66,666 + GFF3239 0.41 +0.4 66,800 - GFF3239 0.60 -0.3 66,964 - GFF3239 0.84 -1.0 66,964 - GFF3239 0.84 -0.5 66,964 - GFF3239 0.84 -0.6 67,023 + -1.1 67,072 + -0.7 67,073 - -0.1 67,073 - -0.1
Or see this region's nucleotide sequence