Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF3062 and GFF3063 are separated by 154 nucleotides GFF3063 and GFF3064 are separated by 180 nucleotides
GFF3062 - hypothetical protein, at 790,610 to 792,724
GFF3062
GFF3063 - Glutathione amide reductase, at 792,879 to 794,240
GFF3063
GFF3064 - hypothetical protein, at 794,421 to 795,314
GFF3064
Position (kb) 792
793
794
795 Strain fitness (log2 ratio) -1
0
1 at 792.729 kb on + strand at 792.729 kb on + strand at 792.729 kb on + strand at 792.730 kb on - strand at 792.730 kb on - strand at 792.730 kb on - strand at 792.730 kb on - strand at 792.733 kb on + strand at 792.733 kb on + strand at 792.733 kb on + strand at 792.734 kb on - strand at 793.173 kb on + strand, within GFF3063 at 793.174 kb on - strand, within GFF3063 at 793.174 kb on - strand, within GFF3063 at 793.416 kb on + strand, within GFF3063 at 793.418 kb on + strand, within GFF3063 at 793.419 kb on - strand, within GFF3063 at 793.476 kb on + strand, within GFF3063 at 793.986 kb on + strand, within GFF3063 at 793.986 kb on + strand, within GFF3063 at 793.986 kb on + strand, within GFF3063 at 794.043 kb on + strand, within GFF3063 at 794.554 kb on + strand, within GFF3064 at 794.602 kb on + strand, within GFF3064 at 794.684 kb on - strand, within GFF3064 at 794.761 kb on + strand, within GFF3064 at 794.762 kb on - strand, within GFF3064 at 795.109 kb on + strand, within GFF3064 at 795.109 kb on + strand, within GFF3064 at 795.110 kb on - strand, within GFF3064 at 795.223 kb on + strand, within GFF3064 at 795.223 kb on + strand, within GFF3064
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 792,729 + +1.5 792,729 + +0.7 792,729 + +1.2 792,730 - +0.7 792,730 - +0.1 792,730 - +0.7 792,730 - +0.3 792,733 + -0.4 792,733 + +0.5 792,733 + -0.1 792,734 - -0.9 793,173 + GFF3063 0.22 +1.1 793,174 - GFF3063 0.22 +0.8 793,174 - GFF3063 0.22 -1.1 793,416 + GFF3063 0.39 -1.5 793,418 + GFF3063 0.40 +0.2 793,419 - GFF3063 0.40 -1.1 793,476 + GFF3063 0.44 +0.5 793,986 + GFF3063 0.81 -0.1 793,986 + GFF3063 0.81 +0.5 793,986 + GFF3063 0.81 +0.1 794,043 + GFF3063 0.85 -1.3 794,554 + GFF3064 0.15 +0.1 794,602 + GFF3064 0.20 -0.1 794,684 - GFF3064 0.29 +0.7 794,761 + GFF3064 0.38 +0.2 794,762 - GFF3064 0.38 +0.1 795,109 + GFF3064 0.77 -0.5 795,109 + GFF3064 0.77 +0.7 795,110 - GFF3064 0.77 +0.3 795,223 + GFF3064 0.90 +0.2 795,223 + GFF3064 0.90 -0.5
Or see this region's nucleotide sequence