Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2918 and GFF2919 overlap by 4 nucleotides GFF2919 and GFF2920 overlap by 1 nucleotides
GFF2918 - hypothetical protein, at 636,067 to 637,863
GFF2918
GFF2919 - hypothetical protein, at 637,860 to 639,926
GFF2919
GFF2920 - hypothetical protein, at 639,926 to 640,984
GFF2920
Position (kb) 637
638
639
640 Strain fitness (log2 ratio) -1
0
1 at 636.860 kb on + strand, within GFF2918 at 636.860 kb on + strand, within GFF2918 at 636.860 kb on + strand, within GFF2918 at 636.861 kb on - strand, within GFF2918 at 637.146 kb on + strand, within GFF2918 at 637.213 kb on + strand, within GFF2918 at 637.214 kb on - strand, within GFF2918 at 637.250 kb on + strand, within GFF2918 at 637.250 kb on + strand, within GFF2918 at 637.250 kb on + strand, within GFF2918 at 637.287 kb on - strand, within GFF2918 at 637.385 kb on + strand, within GFF2918 at 637.385 kb on + strand, within GFF2918 at 637.385 kb on + strand, within GFF2918 at 637.386 kb on - strand, within GFF2918 at 637.386 kb on - strand, within GFF2918 at 637.386 kb on - strand, within GFF2918 at 637.386 kb on - strand, within GFF2918 at 637.386 kb on - strand, within GFF2918 at 637.421 kb on + strand, within GFF2918 at 637.421 kb on + strand, within GFF2918 at 637.422 kb on - strand, within GFF2918 at 637.916 kb on + strand at 638.654 kb on - strand, within GFF2919 at 638.654 kb on - strand, within GFF2919 at 638.710 kb on + strand, within GFF2919 at 638.711 kb on - strand, within GFF2919 at 638.756 kb on - strand, within GFF2919 at 638.770 kb on + strand, within GFF2919 at 638.771 kb on - strand, within GFF2919 at 639.040 kb on + strand, within GFF2919 at 639.040 kb on + strand, within GFF2919 at 639.040 kb on + strand, within GFF2919 at 639.041 kb on - strand, within GFF2919 at 639.041 kb on - strand, within GFF2919 at 639.127 kb on + strand, within GFF2919 at 639.127 kb on + strand, within GFF2919 at 639.128 kb on - strand, within GFF2919 at 639.128 kb on - strand, within GFF2919 at 639.128 kb on - strand, within GFF2919 at 639.128 kb on - strand, within GFF2919 at 639.163 kb on + strand, within GFF2919 at 639.266 kb on - strand, within GFF2919 at 639.514 kb on + strand, within GFF2919 at 639.514 kb on + strand, within GFF2919 at 639.515 kb on - strand, within GFF2919 at 639.572 kb on - strand, within GFF2919 at 640.104 kb on + strand, within GFF2920 at 640.104 kb on + strand, within GFF2920 at 640.149 kb on + strand, within GFF2920 at 640.149 kb on + strand, within GFF2920 at 640.149 kb on + strand, within GFF2920 at 640.149 kb on + strand, within GFF2920 at 640.150 kb on - strand, within GFF2920 at 640.150 kb on - strand, within GFF2920 at 640.549 kb on - strand, within GFF2920 at 640.749 kb on + strand, within GFF2920 at 640.750 kb on - strand, within GFF2920 at 640.750 kb on - strand, within GFF2920 at 640.750 kb on - strand, within GFF2920 at 640.750 kb on - strand, within GFF2920
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 636,860 + GFF2918 0.44 -0.5 636,860 + GFF2918 0.44 -0.1 636,860 + GFF2918 0.44 -0.5 636,861 - GFF2918 0.44 +0.9 637,146 + GFF2918 0.60 -0.4 637,213 + GFF2918 0.64 -0.4 637,214 - GFF2918 0.64 +0.6 637,250 + GFF2918 0.66 -0.1 637,250 + GFF2918 0.66 +0.2 637,250 + GFF2918 0.66 -0.3 637,287 - GFF2918 0.68 +0.1 637,385 + GFF2918 0.73 -0.0 637,385 + GFF2918 0.73 +0.2 637,385 + GFF2918 0.73 -0.0 637,386 - GFF2918 0.73 -0.5 637,386 - GFF2918 0.73 +0.7 637,386 - GFF2918 0.73 +0.1 637,386 - GFF2918 0.73 +1.3 637,386 - GFF2918 0.73 +0.0 637,421 + GFF2918 0.75 +0.1 637,421 + GFF2918 0.75 -0.4 637,422 - GFF2918 0.75 -0.9 637,916 + +0.3 638,654 - GFF2919 0.38 +0.2 638,654 - GFF2919 0.38 -0.2 638,710 + GFF2919 0.41 -1.1 638,711 - GFF2919 0.41 -0.4 638,756 - GFF2919 0.43 +0.2 638,770 + GFF2919 0.44 -0.4 638,771 - GFF2919 0.44 -0.3 639,040 + GFF2919 0.57 +0.4 639,040 + GFF2919 0.57 +0.5 639,040 + GFF2919 0.57 -1.2 639,041 - GFF2919 0.57 +0.7 639,041 - GFF2919 0.57 -0.4 639,127 + GFF2919 0.61 +0.3 639,127 + GFF2919 0.61 -0.4 639,128 - GFF2919 0.61 -0.2 639,128 - GFF2919 0.61 -1.0 639,128 - GFF2919 0.61 +0.5 639,128 - GFF2919 0.61 +0.7 639,163 + GFF2919 0.63 +0.0 639,266 - GFF2919 0.68 +0.3 639,514 + GFF2919 0.80 +0.4 639,514 + GFF2919 0.80 +0.3 639,515 - GFF2919 0.80 +0.6 639,572 - GFF2919 0.83 -0.4 640,104 + GFF2920 0.17 +0.4 640,104 + GFF2920 0.17 +0.2 640,149 + GFF2920 0.21 -0.3 640,149 + GFF2920 0.21 -0.8 640,149 + GFF2920 0.21 +0.5 640,149 + GFF2920 0.21 -1.0 640,150 - GFF2920 0.21 -0.4 640,150 - GFF2920 0.21 +0.5 640,549 - GFF2920 0.59 -0.4 640,749 + GFF2920 0.78 -0.0 640,750 - GFF2920 0.78 -0.5 640,750 - GFF2920 0.78 +0.3 640,750 - GFF2920 0.78 +0.7 640,750 - GFF2920 0.78 -0.5
Or see this region's nucleotide sequence