Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2913 and GFF2914 are separated by 7 nucleotides GFF2914 and GFF2915 are separated by 11 nucleotides GFF2915 and GFF2916 are separated by 232 nucleotides
GFF2913 - hypothetical protein, at 631,182 to 631,988
GFF2913
GFF2914 - hypothetical protein, at 631,996 to 632,922
GFF2914
GFF2915 - hypothetical protein, at 632,934 to 634,001
GFF2915
GFF2916 - N-carbamoylsarcosine amidase, at 634,234 to 634,944
GFF2916
Position (kb) 632
633
634
635 Strain fitness (log2 ratio) -1
0
1
2 at 631.960 kb on + strand at 631.960 kb on + strand at 631.961 kb on - strand at 631.961 kb on - strand at 631.961 kb on - strand at 632.015 kb on + strand at 632.130 kb on - strand, within GFF2914 at 632.187 kb on - strand, within GFF2914 at 632.187 kb on - strand, within GFF2914 at 632.187 kb on - strand, within GFF2914 at 632.187 kb on - strand, within GFF2914 at 632.187 kb on - strand, within GFF2914 at 632.187 kb on - strand, within GFF2914 at 632.408 kb on + strand, within GFF2914 at 632.408 kb on + strand, within GFF2914 at 632.408 kb on + strand, within GFF2914 at 632.409 kb on - strand, within GFF2914 at 632.666 kb on + strand, within GFF2914 at 632.667 kb on - strand, within GFF2914 at 632.667 kb on - strand, within GFF2914 at 632.667 kb on - strand, within GFF2914 at 632.670 kb on - strand, within GFF2914 at 632.693 kb on + strand, within GFF2914 at 632.693 kb on + strand, within GFF2914 at 632.693 kb on + strand, within GFF2914 at 632.754 kb on - strand, within GFF2914 at 632.979 kb on - strand at 633.094 kb on + strand, within GFF2915 at 633.095 kb on - strand, within GFF2915 at 633.151 kb on + strand, within GFF2915 at 633.286 kb on + strand, within GFF2915 at 633.286 kb on + strand, within GFF2915 at 633.287 kb on - strand, within GFF2915 at 633.287 kb on - strand, within GFF2915 at 633.287 kb on - strand, within GFF2915 at 633.287 kb on - strand, within GFF2915 at 633.349 kb on + strand, within GFF2915 at 633.349 kb on + strand, within GFF2915 at 633.349 kb on + strand, within GFF2915 at 633.451 kb on + strand, within GFF2915 at 633.452 kb on - strand, within GFF2915 at 633.553 kb on + strand, within GFF2915 at 633.558 kb on + strand, within GFF2915 at 633.573 kb on - strand, within GFF2915 at 633.573 kb on - strand, within GFF2915 at 633.574 kb on + strand, within GFF2915 at 633.574 kb on + strand, within GFF2915 at 633.575 kb on - strand, within GFF2915 at 633.628 kb on + strand, within GFF2915 at 633.628 kb on + strand, within GFF2915 at 633.629 kb on - strand, within GFF2915 at 633.629 kb on - strand, within GFF2915 at 633.653 kb on + strand, within GFF2915 at 633.654 kb on - strand, within GFF2915 at 633.654 kb on - strand, within GFF2915 at 634.016 kb on + strand at 634.016 kb on + strand at 634.100 kb on + strand at 634.101 kb on - strand at 634.101 kb on - strand at 634.502 kb on + strand, within GFF2916 at 634.502 kb on + strand, within GFF2916 at 634.502 kb on + strand, within GFF2916 at 634.502 kb on + strand, within GFF2916 at 634.502 kb on + strand, within GFF2916 at 634.503 kb on - strand, within GFF2916 at 634.503 kb on - strand, within GFF2916 at 634.503 kb on - strand, within GFF2916 at 634.503 kb on - strand, within GFF2916 at 634.564 kb on + strand, within GFF2916 at 634.564 kb on + strand, within GFF2916 at 634.565 kb on - strand, within GFF2916 at 634.679 kb on + strand, within GFF2916 at 634.679 kb on + strand, within GFF2916 at 634.679 kb on + strand, within GFF2916
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 631,960 + +0.3 631,960 + +1.2 631,961 - +0.6 631,961 - +0.0 631,961 - -0.2 632,015 + -0.0 632,130 - GFF2914 0.14 -0.7 632,187 - GFF2914 0.21 -0.2 632,187 - GFF2914 0.21 -0.5 632,187 - GFF2914 0.21 -1.2 632,187 - GFF2914 0.21 -0.1 632,187 - GFF2914 0.21 +1.1 632,187 - GFF2914 0.21 +0.0 632,408 + GFF2914 0.44 +0.5 632,408 + GFF2914 0.44 -0.9 632,408 + GFF2914 0.44 +0.3 632,409 - GFF2914 0.45 +0.0 632,666 + GFF2914 0.72 +1.8 632,667 - GFF2914 0.72 +0.1 632,667 - GFF2914 0.72 -0.4 632,667 - GFF2914 0.72 -0.1 632,670 - GFF2914 0.73 -0.5 632,693 + GFF2914 0.75 +0.4 632,693 + GFF2914 0.75 +0.2 632,693 + GFF2914 0.75 +0.4 632,754 - GFF2914 0.82 -0.5 632,979 - +0.9 633,094 + GFF2915 0.15 +0.2 633,095 - GFF2915 0.15 -0.3 633,151 + GFF2915 0.20 +0.8 633,286 + GFF2915 0.33 +1.2 633,286 + GFF2915 0.33 -0.4 633,287 - GFF2915 0.33 +0.4 633,287 - GFF2915 0.33 +0.2 633,287 - GFF2915 0.33 +0.3 633,287 - GFF2915 0.33 +0.7 633,349 + GFF2915 0.39 +0.3 633,349 + GFF2915 0.39 +0.5 633,349 + GFF2915 0.39 +0.2 633,451 + GFF2915 0.48 +0.4 633,452 - GFF2915 0.49 +0.5 633,553 + GFF2915 0.58 +0.3 633,558 + GFF2915 0.58 +0.5 633,573 - GFF2915 0.60 +0.2 633,573 - GFF2915 0.60 -0.6 633,574 + GFF2915 0.60 +0.6 633,574 + GFF2915 0.60 -0.5 633,575 - GFF2915 0.60 -0.0 633,628 + GFF2915 0.65 -0.5 633,628 + GFF2915 0.65 +0.9 633,629 - GFF2915 0.65 -0.9 633,629 - GFF2915 0.65 +0.1 633,653 + GFF2915 0.67 +0.2 633,654 - GFF2915 0.67 -0.4 633,654 - GFF2915 0.67 +0.3 634,016 + +0.4 634,016 + -0.6 634,100 + +0.8 634,101 - +0.6 634,101 - -0.1 634,502 + GFF2916 0.38 -0.9 634,502 + GFF2916 0.38 +0.2 634,502 + GFF2916 0.38 -0.2 634,502 + GFF2916 0.38 -0.1 634,502 + GFF2916 0.38 +0.5 634,503 - GFF2916 0.38 +1.2 634,503 - GFF2916 0.38 +0.2 634,503 - GFF2916 0.38 +0.1 634,503 - GFF2916 0.38 +0.7 634,564 + GFF2916 0.46 +0.2 634,564 + GFF2916 0.46 +0.9 634,565 - GFF2916 0.47 -0.3 634,679 + GFF2916 0.63 +0.5 634,679 + GFF2916 0.63 +1.2 634,679 + GFF2916 0.63 -0.2
Or see this region's nucleotide sequence