Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2779 and GFF2780 are separated by 15 nucleotides GFF2780 and GFF2781 are separated by 9 nucleotides GFF2781 and GFF2782 overlap by 8 nucleotides GFF2782 and GFF2783 are separated by 396 nucleotides
GFF2779 - Arsenical-resistance protein Acr3, at 483,333 to 484,385
GFF2779
GFF2780 - Arsenate reductase, at 484,401 to 484,823
GFF2780
GFF2781 - Arsenate reductase, at 484,833 to 485,372
GFF2781
GFF2782 - hypothetical protein, at 485,365 to 485,727
GFF2782
GFF2783 - hypothetical protein, at 486,124 to 487,110
GFF2783
Position (kb) 485
486 Strain fitness (log2 ratio) -1
0
1 at 484.366 kb on + strand at 484.366 kb on + strand at 484.366 kb on + strand at 484.367 kb on - strand at 484.398 kb on + strand at 484.398 kb on + strand at 484.399 kb on - strand at 484.734 kb on + strand, within GFF2780 at 484.734 kb on + strand, within GFF2780 at 484.734 kb on + strand, within GFF2780 at 484.735 kb on - strand, within GFF2780 at 484.807 kb on + strand at 484.808 kb on - strand at 484.808 kb on - strand at 484.964 kb on - strand, within GFF2781 at 484.964 kb on - strand, within GFF2781 at 485.173 kb on + strand, within GFF2781 at 485.173 kb on + strand, within GFF2781 at 485.173 kb on + strand, within GFF2781 at 485.173 kb on + strand, within GFF2781 at 485.174 kb on - strand, within GFF2781 at 485.174 kb on - strand, within GFF2781 at 485.495 kb on + strand, within GFF2782 at 485.495 kb on + strand, within GFF2782 at 485.495 kb on + strand, within GFF2782 at 485.507 kb on + strand, within GFF2782 at 485.507 kb on + strand, within GFF2782 at 485.507 kb on + strand, within GFF2782 at 485.508 kb on - strand, within GFF2782 at 485.508 kb on - strand, within GFF2782 at 485.508 kb on - strand, within GFF2782 at 485.762 kb on + strand at 485.762 kb on + strand at 485.826 kb on + strand at 485.826 kb on + strand at 485.827 kb on - strand at 485.827 kb on - strand at 485.891 kb on + strand at 485.891 kb on + strand at 485.891 kb on + strand at 485.891 kb on + strand at 485.892 kb on - strand at 486.164 kb on + strand at 486.318 kb on - strand, within GFF2783 at 486.442 kb on + strand, within GFF2783 at 486.443 kb on - strand, within GFF2783 at 486.520 kb on + strand, within GFF2783 at 486.547 kb on + strand, within GFF2783 at 486.547 kb on + strand, within GFF2783 at 486.548 kb on - strand, within GFF2783 at 486.548 kb on - strand, within GFF2783 at 486.658 kb on + strand, within GFF2783 at 486.658 kb on + strand, within GFF2783 at 486.659 kb on - strand, within GFF2783
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 484,366 + -0.9 484,366 + -0.5 484,366 + -0.1 484,367 - -0.0 484,398 + +0.4 484,398 + -0.0 484,399 - +0.8 484,734 + GFF2780 0.79 +0.2 484,734 + GFF2780 0.79 +1.1 484,734 + GFF2780 0.79 -0.8 484,735 - GFF2780 0.79 +0.3 484,807 + -0.6 484,808 - -1.1 484,808 - +0.2 484,964 - GFF2781 0.24 +1.0 484,964 - GFF2781 0.24 -0.0 485,173 + GFF2781 0.63 +0.2 485,173 + GFF2781 0.63 +0.6 485,173 + GFF2781 0.63 +0.6 485,173 + GFF2781 0.63 +0.4 485,174 - GFF2781 0.63 -0.3 485,174 - GFF2781 0.63 -1.1 485,495 + GFF2782 0.36 -0.1 485,495 + GFF2782 0.36 -0.0 485,495 + GFF2782 0.36 +0.4 485,507 + GFF2782 0.39 -0.0 485,507 + GFF2782 0.39 -0.1 485,507 + GFF2782 0.39 -0.8 485,508 - GFF2782 0.39 +1.0 485,508 - GFF2782 0.39 -0.3 485,508 - GFF2782 0.39 -0.6 485,762 + -0.4 485,762 + +1.1 485,826 + -0.2 485,826 + +0.2 485,827 - -0.3 485,827 - -0.3 485,891 + +0.2 485,891 + +0.3 485,891 + -1.0 485,891 + -0.6 485,892 - +0.1 486,164 + +0.4 486,318 - GFF2783 0.20 -0.9 486,442 + GFF2783 0.32 -0.7 486,443 - GFF2783 0.32 +0.4 486,520 + GFF2783 0.40 -0.4 486,547 + GFF2783 0.43 +0.7 486,547 + GFF2783 0.43 -0.0 486,548 - GFF2783 0.43 +0.4 486,548 - GFF2783 0.43 -0.9 486,658 + GFF2783 0.54 -0.1 486,658 + GFF2783 0.54 +0.3 486,659 - GFF2783 0.54 -0.4
Or see this region's nucleotide sequence