Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2749 and GFF2750 overlap by 4 nucleotides GFF2750 and GFF2751 overlap by 4 nucleotides
GFF2749 - putative siderophore transport system ATP-binding protein YusV, at 450,817 to 451,656
GFF2749
GFF2750 - putative siderophore transport system permease protein YfiZ, at 451,653 to 452,711
GFF2750
GFF2751 - Iron-uptake system permease protein FeuC, at 452,708 to 453,757
GFF2751
Position (kb) 451
452
453 Strain fitness (log2 ratio) -1
0
1 at 450.663 kb on + strand at 450.663 kb on + strand at 450.663 kb on + strand at 450.664 kb on - strand at 450.718 kb on - strand at 450.718 kb on - strand at 450.720 kb on + strand at 450.720 kb on + strand at 450.720 kb on + strand at 450.721 kb on - strand at 450.721 kb on - strand at 450.721 kb on - strand at 450.802 kb on + strand at 450.895 kb on + strand at 451.141 kb on + strand, within GFF2749 at 451.142 kb on - strand, within GFF2749 at 451.142 kb on - strand, within GFF2749 at 451.364 kb on - strand, within GFF2749 at 451.378 kb on + strand, within GFF2749 at 451.379 kb on - strand, within GFF2749 at 451.379 kb on - strand, within GFF2749 at 451.379 kb on - strand, within GFF2749 at 451.475 kb on - strand, within GFF2749 at 451.789 kb on + strand, within GFF2750 at 452.290 kb on - strand, within GFF2750 at 452.290 kb on - strand, within GFF2750 at 452.290 kb on - strand, within GFF2750 at 452.860 kb on + strand, within GFF2751 at 452.860 kb on + strand, within GFF2751 at 452.860 kb on + strand, within GFF2751 at 452.861 kb on - strand, within GFF2751 at 452.861 kb on - strand, within GFF2751 at 452.878 kb on + strand, within GFF2751 at 452.879 kb on - strand, within GFF2751
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 450,663 + -0.4 450,663 + -0.0 450,663 + -0.2 450,664 - -0.2 450,718 - +0.1 450,718 - +0.1 450,720 + +0.3 450,720 + -1.0 450,720 + -1.1 450,721 - -0.5 450,721 - -0.2 450,721 - +0.5 450,802 + -0.9 450,895 + -0.3 451,141 + GFF2749 0.39 +0.2 451,142 - GFF2749 0.39 +0.1 451,142 - GFF2749 0.39 +0.9 451,364 - GFF2749 0.65 +0.0 451,378 + GFF2749 0.67 +0.4 451,379 - GFF2749 0.67 +0.2 451,379 - GFF2749 0.67 +0.9 451,379 - GFF2749 0.67 -0.7 451,475 - GFF2749 0.78 +0.3 451,789 + GFF2750 0.13 -1.0 452,290 - GFF2750 0.60 -1.6 452,290 - GFF2750 0.60 -1.0 452,290 - GFF2750 0.60 +0.8 452,860 + GFF2751 0.14 +1.1 452,860 + GFF2751 0.14 +0.2 452,860 + GFF2751 0.14 +0.3 452,861 - GFF2751 0.15 +1.3 452,861 - GFF2751 0.15 -0.4 452,878 + GFF2751 0.16 -0.2 452,879 - GFF2751 0.16 -0.5
Or see this region's nucleotide sequence