Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2671 and GFF2672 are separated by 346 nucleotides GFF2672 and GFF2673 overlap by 4 nucleotides GFF2673 and GFF2674 are separated by 37 nucleotides
GFF2671 - putative manganese catalase, at 355,973 to 356,851
GFF2671
GFF2672 - hypothetical protein, at 357,198 to 357,530
GFF2672
GFF2673 - hypothetical protein, at 357,527 to 358,102
GFF2673
GFF2674 - Inositol-3-phosphate synthase, at 358,140 to 359,249
GFF2674
Position (kb) 357
358 Strain fitness (log2 ratio) -1
0
1
2 at 356.393 kb on + strand, within GFF2671 at 356.393 kb on + strand, within GFF2671 at 356.393 kb on + strand, within GFF2671 at 356.393 kb on + strand, within GFF2671 at 356.393 kb on + strand, within GFF2671 at 356.393 kb on + strand, within GFF2671 at 356.394 kb on - strand, within GFF2671 at 356.394 kb on - strand, within GFF2671 at 356.394 kb on - strand, within GFF2671 at 356.394 kb on - strand, within GFF2671 at 356.394 kb on - strand, within GFF2671 at 356.394 kb on - strand, within GFF2671 at 356.394 kb on - strand, within GFF2671 at 356.481 kb on - strand, within GFF2671 at 356.481 kb on - strand, within GFF2671 at 356.481 kb on - strand, within GFF2671 at 356.516 kb on - strand, within GFF2671 at 356.654 kb on + strand, within GFF2671 at 356.654 kb on + strand, within GFF2671 at 356.655 kb on - strand, within GFF2671 at 356.655 kb on - strand, within GFF2671 at 356.660 kb on + strand, within GFF2671 at 356.660 kb on + strand, within GFF2671 at 356.661 kb on - strand, within GFF2671 at 356.661 kb on - strand, within GFF2671 at 356.661 kb on - strand, within GFF2671 at 356.662 kb on + strand, within GFF2671 at 356.662 kb on + strand, within GFF2671 at 356.663 kb on - strand, within GFF2671 at 356.663 kb on - strand, within GFF2671 at 356.663 kb on - strand, within GFF2671 at 356.663 kb on - strand, within GFF2671 at 356.665 kb on - strand, within GFF2671 at 356.744 kb on + strand, within GFF2671 at 356.744 kb on + strand, within GFF2671 at 356.807 kb on + strand at 356.807 kb on + strand at 356.807 kb on + strand at 356.808 kb on - strand at 356.808 kb on - strand at 356.874 kb on + strand at 356.874 kb on + strand at 356.874 kb on + strand at 356.875 kb on - strand at 356.875 kb on - strand at 356.875 kb on - strand at 357.021 kb on + strand at 357.081 kb on + strand at 357.081 kb on + strand at 357.081 kb on + strand at 357.081 kb on + strand at 357.082 kb on - strand at 357.082 kb on - strand at 357.082 kb on - strand at 357.082 kb on - strand at 357.082 kb on - strand at 357.082 kb on - strand at 357.082 kb on - strand at 357.115 kb on + strand at 357.116 kb on - strand at 357.402 kb on + strand, within GFF2672 at 357.403 kb on - strand, within GFF2672 at 357.403 kb on - strand, within GFF2672 at 357.604 kb on + strand, within GFF2673 at 357.604 kb on + strand, within GFF2673 at 357.604 kb on + strand, within GFF2673 at 357.605 kb on - strand, within GFF2673 at 357.681 kb on + strand, within GFF2673 at 357.852 kb on + strand, within GFF2673 at 357.852 kb on + strand, within GFF2673 at 357.985 kb on + strand, within GFF2673 at 357.986 kb on - strand, within GFF2673 at 357.986 kb on - strand, within GFF2673 at 357.986 kb on - strand, within GFF2673 at 357.994 kb on + strand, within GFF2673 at 358.044 kb on + strand, within GFF2673 at 358.044 kb on + strand, within GFF2673 at 358.044 kb on + strand, within GFF2673 at 358.045 kb on - strand at 358.045 kb on - strand at 358.218 kb on + strand at 358.218 kb on + strand at 358.453 kb on - strand, within GFF2674 at 358.453 kb on - strand, within GFF2674
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 356,393 + GFF2671 0.48 -0.6 356,393 + GFF2671 0.48 -0.0 356,393 + GFF2671 0.48 -0.4 356,393 + GFF2671 0.48 -0.5 356,393 + GFF2671 0.48 -0.7 356,393 + GFF2671 0.48 -0.2 356,394 - GFF2671 0.48 -0.5 356,394 - GFF2671 0.48 -0.8 356,394 - GFF2671 0.48 -0.1 356,394 - GFF2671 0.48 +0.2 356,394 - GFF2671 0.48 -0.1 356,394 - GFF2671 0.48 +0.3 356,394 - GFF2671 0.48 +1.2 356,481 - GFF2671 0.58 +0.6 356,481 - GFF2671 0.58 +0.4 356,481 - GFF2671 0.58 -0.2 356,516 - GFF2671 0.62 +0.4 356,654 + GFF2671 0.77 +0.1 356,654 + GFF2671 0.77 -0.3 356,655 - GFF2671 0.78 +0.5 356,655 - GFF2671 0.78 -0.4 356,660 + GFF2671 0.78 +0.3 356,660 + GFF2671 0.78 +0.5 356,661 - GFF2671 0.78 -0.3 356,661 - GFF2671 0.78 +1.2 356,661 - GFF2671 0.78 +0.7 356,662 + GFF2671 0.78 -0.1 356,662 + GFF2671 0.78 -0.6 356,663 - GFF2671 0.78 -0.1 356,663 - GFF2671 0.78 +0.2 356,663 - GFF2671 0.78 +0.6 356,663 - GFF2671 0.78 +0.1 356,665 - GFF2671 0.79 -0.4 356,744 + GFF2671 0.88 +0.1 356,744 + GFF2671 0.88 -0.3 356,807 + +0.7 356,807 + +1.0 356,807 + -1.3 356,808 - -0.2 356,808 - +0.5 356,874 + +0.2 356,874 + +0.4 356,874 + -0.8 356,875 - -1.2 356,875 - -0.9 356,875 - -0.1 357,021 + +0.4 357,081 + +0.8 357,081 + +0.8 357,081 + -0.3 357,081 + -0.6 357,082 - +0.4 357,082 - +1.6 357,082 - -0.4 357,082 - +1.8 357,082 - -0.7 357,082 - -0.4 357,082 - -0.3 357,115 + -0.7 357,116 - +0.4 357,402 + GFF2672 0.61 -0.7 357,403 - GFF2672 0.62 -1.2 357,403 - GFF2672 0.62 -0.6 357,604 + GFF2673 0.13 +0.4 357,604 + GFF2673 0.13 -0.4 357,604 + GFF2673 0.13 -0.5 357,605 - GFF2673 0.14 +0.2 357,681 + GFF2673 0.27 +0.5 357,852 + GFF2673 0.56 +0.4 357,852 + GFF2673 0.56 -0.6 357,985 + GFF2673 0.80 -0.3 357,986 - GFF2673 0.80 +0.2 357,986 - GFF2673 0.80 +0.2 357,986 - GFF2673 0.80 +1.6 357,994 + GFF2673 0.81 +0.4 358,044 + GFF2673 0.90 +1.1 358,044 + GFF2673 0.90 +0.6 358,044 + GFF2673 0.90 +0.2 358,045 - -0.2 358,045 - +0.2 358,218 + +0.2 358,218 + -1.2 358,453 - GFF2674 0.28 -0.0 358,453 - GFF2674 0.28 +0.5
Or see this region's nucleotide sequence