Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2158 and GFF2159 are separated by 11 nucleotides GFF2159 and GFF2160 are separated by 36 nucleotides
GFF2158 - Formylglycine-generating enzyme, at 850,356 to 851,354
GFF2158
GFF2159 - Arylsulfatase, at 851,366 to 852,835
GFF2159
GFF2160 - Adaptive-response sensory-kinase SasA, at 852,872 to 854,311
GFF2160
Position (kb) 851
852
853 Strain fitness (log2 ratio) -1
0
1 at 850.590 kb on + strand, within GFF2158 at 850.733 kb on - strand, within GFF2158 at 850.833 kb on + strand, within GFF2158 at 850.834 kb on - strand, within GFF2158 at 851.256 kb on + strand at 851.257 kb on - strand at 851.257 kb on - strand at 851.516 kb on + strand, within GFF2159 at 851.516 kb on + strand, within GFF2159 at 851.517 kb on - strand, within GFF2159 at 851.628 kb on - strand, within GFF2159 at 851.729 kb on + strand, within GFF2159 at 851.729 kb on + strand, within GFF2159 at 851.729 kb on + strand, within GFF2159 at 851.729 kb on + strand, within GFF2159 at 851.835 kb on - strand, within GFF2159 at 851.867 kb on + strand, within GFF2159 at 851.867 kb on + strand, within GFF2159 at 851.930 kb on + strand, within GFF2159 at 851.963 kb on + strand, within GFF2159 at 851.964 kb on - strand, within GFF2159 at 852.039 kb on - strand, within GFF2159 at 852.098 kb on + strand, within GFF2159 at 852.098 kb on + strand, within GFF2159 at 852.098 kb on + strand, within GFF2159 at 852.098 kb on + strand, within GFF2159 at 852.098 kb on + strand, within GFF2159 at 852.098 kb on + strand, within GFF2159 at 852.098 kb on + strand, within GFF2159 at 852.098 kb on + strand, within GFF2159 at 852.099 kb on - strand, within GFF2159 at 852.099 kb on - strand, within GFF2159 at 852.099 kb on - strand, within GFF2159 at 852.099 kb on - strand, within GFF2159 at 852.099 kb on - strand, within GFF2159 at 852.131 kb on + strand, within GFF2159 at 852.260 kb on + strand, within GFF2159 at 852.420 kb on + strand, within GFF2159 at 852.420 kb on + strand, within GFF2159 at 852.421 kb on - strand, within GFF2159 at 852.421 kb on - strand, within GFF2159 at 852.421 kb on - strand, within GFF2159 at 852.543 kb on - strand, within GFF2159 at 852.543 kb on - strand, within GFF2159 at 852.810 kb on - strand at 852.810 kb on - strand at 852.833 kb on + strand at 852.833 kb on + strand at 853.156 kb on - strand, within GFF2160 at 853.173 kb on - strand, within GFF2160
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 850,590 + GFF2158 0.23 -0.2 850,733 - GFF2158 0.38 +0.1 850,833 + GFF2158 0.48 +0.2 850,834 - GFF2158 0.48 -0.5 851,256 + +0.1 851,257 - +0.3 851,257 - +0.1 851,516 + GFF2159 0.10 +0.9 851,516 + GFF2159 0.10 -0.1 851,517 - GFF2159 0.10 -0.3 851,628 - GFF2159 0.18 -0.0 851,729 + GFF2159 0.25 -0.1 851,729 + GFF2159 0.25 -0.8 851,729 + GFF2159 0.25 +0.3 851,729 + GFF2159 0.25 -0.2 851,835 - GFF2159 0.32 +0.0 851,867 + GFF2159 0.34 -0.3 851,867 + GFF2159 0.34 +1.0 851,930 + GFF2159 0.38 -0.2 851,963 + GFF2159 0.41 -0.0 851,964 - GFF2159 0.41 +0.1 852,039 - GFF2159 0.46 -0.7 852,098 + GFF2159 0.50 +0.0 852,098 + GFF2159 0.50 -1.1 852,098 + GFF2159 0.50 +1.1 852,098 + GFF2159 0.50 +1.1 852,098 + GFF2159 0.50 +0.6 852,098 + GFF2159 0.50 +0.6 852,098 + GFF2159 0.50 +0.1 852,098 + GFF2159 0.50 -0.1 852,099 - GFF2159 0.50 -0.0 852,099 - GFF2159 0.50 +0.4 852,099 - GFF2159 0.50 -0.1 852,099 - GFF2159 0.50 +0.9 852,099 - GFF2159 0.50 +0.7 852,131 + GFF2159 0.52 -0.6 852,260 + GFF2159 0.61 -1.4 852,420 + GFF2159 0.72 +0.2 852,420 + GFF2159 0.72 +0.8 852,421 - GFF2159 0.72 +0.6 852,421 - GFF2159 0.72 +1.1 852,421 - GFF2159 0.72 -0.0 852,543 - GFF2159 0.80 -0.7 852,543 - GFF2159 0.80 +0.5 852,810 - -1.0 852,810 - +0.0 852,833 + -0.2 852,833 + +0.1 853,156 - GFF2160 0.20 +0.6 853,173 - GFF2160 0.21 -0.2
Or see this region's nucleotide sequence