Experiment: Methanol and casaminos (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2155 and GFF2156 are separated by 76 nucleotides GFF2156 and GFF2157 are separated by 164 nucleotides
GFF2155 - Homoserine O-acetyltransferase, at 845,555 to 848,089
GFF2155
GFF2156 - Tropinesterase, at 848,166 to 849,020
GFF2156
GFF2157 - hypothetical protein, at 849,185 to 850,222
GFF2157
Position (kb) 848
849
850 Strain fitness (log2 ratio) -2
-1
0
1 at 847.256 kb on + strand, within GFF2155 at 847.295 kb on + strand, within GFF2155 at 847.361 kb on + strand, within GFF2155 at 847.362 kb on - strand, within GFF2155 at 847.362 kb on - strand, within GFF2155 at 847.362 kb on - strand, within GFF2155 at 847.572 kb on - strand, within GFF2155 at 847.592 kb on + strand, within GFF2155 at 847.592 kb on + strand, within GFF2155 at 847.592 kb on + strand, within GFF2155 at 847.593 kb on - strand, within GFF2155 at 847.593 kb on - strand, within GFF2155 at 847.685 kb on + strand, within GFF2155 at 847.685 kb on + strand, within GFF2155 at 847.685 kb on + strand, within GFF2155 at 847.685 kb on + strand, within GFF2155 at 847.685 kb on + strand, within GFF2155 at 847.686 kb on - strand, within GFF2155 at 847.686 kb on - strand, within GFF2155 at 847.686 kb on - strand, within GFF2155 at 847.730 kb on + strand, within GFF2155 at 847.730 kb on + strand, within GFF2155 at 847.731 kb on - strand, within GFF2155 at 847.731 kb on - strand, within GFF2155 at 847.731 kb on - strand, within GFF2155 at 847.731 kb on - strand, within GFF2155 at 847.731 kb on - strand, within GFF2155 at 847.899 kb on - strand at 848.087 kb on + strand at 848.087 kb on + strand at 848.087 kb on + strand at 848.088 kb on - strand at 848.379 kb on + strand, within GFF2156 at 848.600 kb on + strand, within GFF2156 at 848.716 kb on + strand, within GFF2156 at 848.898 kb on + strand, within GFF2156 at 848.983 kb on - strand at 848.983 kb on - strand at 848.991 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Methanol and casaminos (C) remove 847,256 + GFF2155 0.67 +0.3 847,295 + GFF2155 0.69 +0.6 847,361 + GFF2155 0.71 +0.0 847,362 - GFF2155 0.71 -0.7 847,362 - GFF2155 0.71 -0.3 847,362 - GFF2155 0.71 +0.3 847,572 - GFF2155 0.80 +0.1 847,592 + GFF2155 0.80 -1.0 847,592 + GFF2155 0.80 -0.5 847,592 + GFF2155 0.80 -0.9 847,593 - GFF2155 0.80 -0.1 847,593 - GFF2155 0.80 +0.4 847,685 + GFF2155 0.84 +1.1 847,685 + GFF2155 0.84 +0.1 847,685 + GFF2155 0.84 -0.1 847,685 + GFF2155 0.84 +0.5 847,685 + GFF2155 0.84 -0.2 847,686 - GFF2155 0.84 -1.2 847,686 - GFF2155 0.84 -1.1 847,686 - GFF2155 0.84 -0.8 847,730 + GFF2155 0.86 +0.3 847,730 + GFF2155 0.86 -1.5 847,731 - GFF2155 0.86 +1.0 847,731 - GFF2155 0.86 +0.2 847,731 - GFF2155 0.86 -0.2 847,731 - GFF2155 0.86 +0.0 847,731 - GFF2155 0.86 +0.6 847,899 - -2.2 848,087 + +1.0 848,087 + -0.7 848,087 + -0.8 848,088 - +0.3 848,379 + GFF2156 0.25 -0.5 848,600 + GFF2156 0.51 +0.0 848,716 + GFF2156 0.64 +0.7 848,898 + GFF2156 0.86 -0.1 848,983 - -0.5 848,983 - -0.5 848,991 + +0.0
Or see this region's nucleotide sequence